RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 KCT2Q8NC54 265 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 ZNF417Q8TAU3 575 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 PPP1R14AQ96A00 147 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 C8orf48Q96LL4 319 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 ZNF587Q96SQ5 575 aaPredicted RBP6.08□□□□□ -1.44
TPM1-222ENST00000560131 KLHL25Q9H0H3 589 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 FAM86C1Q9NVL1 165 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 PPP1R9AQ9ULJ8 1098 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 RNF112Q9ULX5 631 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 PYCARDQ9ULZ3 195 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 RIPOR2Q9Y4F9 1068 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 NEXMIFQ5QGS0 1516 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 ARHGEF40Q8TER5 1519 aa6.08□□□□□ -1.44
TPM1-222ENST00000560131 AATKQ6ZMQ8 1374 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ADGRF5Q8IZF2 1346 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 SALL3Q9BXA9 1300 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 C9orf172C9J069 976 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 PRODHO43272 600 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ADAM11O75078 769 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 HMMRO75330 724 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ZSCAN22P10073 491 aaPredicted RBP6.07□□□□□ -1.44
TPM1-222ENST00000560131 NTF4P34130 210 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 CAP2P40123 477 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 MMP14P50281 582 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 GUCY2FP51841 1108 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 LMOD3Q0VAK6 560 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 EFCAB2Q5VUJ9 269 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 SARM1Q6SZW1 724 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ADAT2Q7Z6V5 191 aaKnown RBP6.07□□□□□ -1.44
TPM1-222ENST00000560131 ZNF227Q86WZ6 799 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 PLA2G4DQ86XP0 818 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 CCDC144CPQ8IYA2 1237 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 PPM1KQ8N3J5 372 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 BVESQ8NE79 360 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 TDRD7Q8NHU6 1098 aaKnown RBP6.07□□□□□ -1.44
TPM1-222ENST00000560131 BAHD1Q8TBE0 780 aaPredicted RBP6.07□□□□□ -1.44
TPM1-222ENST00000560131 FGD4Q96M96 766 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 FANCD2OSQ96PS1 177 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 PSMD1Q99460 953 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 GBP3Q9H0R5 595 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 FBRSQ9HAH7 460 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 PRDM6Q9NQX0 595 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 DISC1Q9NRI5 854 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 GABBR1Q9UBS5 961 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 V9GYY5 206 aaPredicted RBP6.07□□□□□ -1.44
TPM1-222ENST00000560131 ABCC3O15438 1527 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ATP7AQ04656 1500 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 CRYBG1Q9Y4K1 1723 aa6.07□□□□□ -1.44
TPM1-222ENST00000560131 ARHGEF10O15013 1369 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 SPAG9O60271 1321 aaKnown RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 PTPRCP08575 1304 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 NOP56O00567 594 aaKnown RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 TPD52L2O43399 206 aaKnown RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 CBFA2T2O43439 604 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 HTATSF1O43719 755 aaKnown RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 PPM1BO75688 479 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 NPTXRO95502 500 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 EYA4O95677 639 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 TNNT1P13805 278 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 H2AFXP16104 143 aaPredicted RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 CAPN2P17655 700 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 POU3F2P20265 443 aaPredicted RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 NEK4P51957 841 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 EPHB1P54762 984 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 IRX3P78415 501 aaPredicted RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 GRIK4Q16099 956 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 NKG7Q16617 165 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 TRIM61Q5EBN2 209 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 C8orf86Q6ZUL3 223 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 DMRTC2Q8IXT2 367 aaPredicted RBP6.06□□□□□ -1.44
TPM1-222ENST00000560131 TXLNBQ8N3L3 684 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 IQUBQ8NA54 791 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 RIN3Q8TB24 985 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 CYB5D2Q8WUJ1 264 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 SLC12A5Q9H2X9 1139 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 ATXN3LQ9H3M9 355 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 L2HGDHQ9H9P8 463 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 KCNK4Q9NYG8 393 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 PSD3Q9NYI0 1048 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 APEX2Q9UBZ4 518 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 STAP2Q9UGK3 403 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 CD163L1Q9NR16 1453 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 HECW2Q9P2P5 1572 aa6.06□□□□□ -1.44
TPM1-222ENST00000560131 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 PREX1Q8TCU6 1659 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 MEGF11A6BM72 1044 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 PRC1O43663 620 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 CST3P01034 146 aaPredicted RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 GRIA2P42262 883 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 IRAK1P51617 712 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 PDE1AP54750 535 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 TBX4P57082 545 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 TPM4P67936 248 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 ADGRE1Q14246 886 aa6.05□□□□□ -1.44
TPM1-222ENST00000560131 SLBPQ14493 270 aaKnown RBP eCLIP6.05□□□□□ -1.44
TPM1-222ENST00000560131 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
TPM1-222ENST00000560131 TTF1Q15361 905 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms