RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 STXBP3O00186 592 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 ADCY6O43306 1168 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 DEXIO95424 95 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 MYL3P08590 195 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 CDK7P50613 346 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 BEX3Q00994 111 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 TLE2Q04725 743 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 ITGA7Q13683 1181 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 LY6KQ17RY6 165 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 TRIM60Q495X7 471 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 CELF3Q5SZQ8 465 aaKnown RBP10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 CXCL17Q6UXB2 119 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 PPTC7Q8NI37 304 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 GPKOWQ92917 476 aaPredicted RBP eCLIP10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 INPP4AQ96PE3 977 aaPredicted RBP10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 SENP7Q9BQF6 1050 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 KATNAL1Q9BW62 490 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 C22orf23Q9BZE7 217 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 ZMYND12Q9H0C1 365 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 TMEM39AQ9NV64 488 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 DDX49Q9Y6V7 483 aaKnown RBP10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 ZNFX1Q9P2E3 1918 aaKnown RBP10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 FRMPD4Q14CM0 1322 aa10.33□□□□□ -0.76
SEMA4B-214ENST00000560003 A0A1W2PPC1 479 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 MYADML2A6NDP7 307 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 NOP56O00567 594 aaKnown RBP10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 CTAGE5O15320 804 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 PFKFB2O60825 505 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 PQBP1O60828 265 aaKnown RBP10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 CLTBP09497 229 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 BMP8BP34820 402 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 ZNF76P36508 570 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 NLRP5P59047 1200 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 PTPN11Q06124 597 aaPredicted RBP10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 NTRK3Q16288 839 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 NFRKBQ6P4R8 1299 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 REXO1Q8N1G1 1221 aaKnown RBP10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 AFG1LQ8WV93 481 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 TNPO1Q92973 898 aaKnown RBP10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 PHKBQ93100 1093 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 SPATA33Q96N06 139 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 PRDM5Q9NQX1 630 aaPredicted RBP10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 RTEL1Q9NZ71 1219 aa10.32□□□□□ -0.76
SEMA4B-214ENST00000560003 KIAA0355O15063 1070 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 SEC24BO95487 1268 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 GGPS1O95749 300 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 RAG1P15918 1043 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 AK2P54819 239 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 MRPS9P82933 396 aaKnown RBP10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 PURAQ00577 322 aaKnown RBP10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 ARHGAP1Q07960 439 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 STK3Q13188 491 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 MTMR1Q13613 665 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 UBE2SQ16763 222 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 C8orf34Q49A92 452 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 METTL7BQ6UX53 244 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 NIPA1Q7RTP0 329 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 SLC43A3Q8NBI5 491 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 ZSCAN31Q96LW9 406 aaPredicted RBP10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 NCOA5Q9HCD5 579 aaKnown RBP10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 TPCN1Q9ULQ1 816 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 ZMYND8Q9ULU4 1186 aaPredicted RBP10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 LIMCH1Q9UPQ0 1083 aa10.31□□□□□ -0.76
SEMA4B-214ENST00000560003 ST18O60284 1047 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 ARIH2O95376 493 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 MMP3P08254 477 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 SYN1P17600 705 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 SREBF1P36956 1147 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 RBM25P49756 843 aaKnown RBP10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 PKN1Q16512 942 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 CEP55Q53EZ4 464 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 C7orf31Q8N865 590 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 COPS5Q92905 334 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 MXRA8Q9BRK3 442 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 SDF4Q9BRK5 362 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 LARP6Q9BRS8 491 aaKnown RBP10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 UBE2OQ9C0C9 1292 aaKnown RBP10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 NOD1Q9Y239 953 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 UBIAD1Q9Y5Z9 338 aa10.3□□□□□ -0.76
SEMA4B-214ENST00000560003 PDE4DIPQ5VU43 2346 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 RGS20O76081 388 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 TIMP1P01033 207 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 CYP3A4P08684 503 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 PYGBP11216 843 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 GNAT1P11488 350 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 UBA1P22314 1058 aaKnown RBP10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 MAGEA10P43363 369 aaPredicted RBP10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 CLK2P49760 499 aaKnown RBP10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 USP11P51784 963 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 ARHGAP4P98171 946 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 FAAP100Q0VG06 881 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 SCRN1Q12765 414 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 TRIM29Q14134 588 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 RABEP1Q15276 862 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 NBPF20Q3BBV1 942 aa10.29□□□□□ -0.76
SEMA4B-214ENST00000560003 FAM47CQ5HY64 1035 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms