RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 HAS3O00219 553 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 RGS20O76081 388 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 ZNF286BP0CG31 522 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 UBA1P22314 1058 aaKnown RBP14.16□□□□□ -0.14
SPG11-219ENST00000559822 RBL2Q08999 1139 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 KIAA0753Q2KHM9 967 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 RNF20Q5VTR2 975 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 LRRC8DQ7L1W4 858 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 IL31RAQ8NI17 732 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 ESYT1Q9BSJ8 1104 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 ALG1Q9BT22 464 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 LSG1Q9H089 658 aaKnown RBP14.16□□□□□ -0.14
SPG11-219ENST00000559822 MLXIPQ9HAP2 919 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 HDAC6Q9UBN7 1215 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 GBF1Q92538 1859 aa14.16□□□□□ -0.14
SPG11-219ENST00000559822 BAZ2BQ9UIF8 2168 aaKnown RBP14.16□□□□□ -0.14
SPG11-219ENST00000559822 FRMPD4Q14CM0 1322 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 SCN5AQ14524 2016 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 NOP56O00567 594 aaKnown RBP14.15□□□□□ -0.14
SPG11-219ENST00000559822 SH2B2O14492 632 aaPredicted RBP14.15□□□□□ -0.14
SPG11-219ENST00000559822 SLC27A2O14975 620 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 LIFRP42702 1097 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 KCNJ6P48051 423 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 RABGGTBP53611 331 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 PTK7Q13308 1070 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 NEDD9Q14511 834 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 XRRA1Q6P2D8 792 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 SMARCC2Q8TAQ2 1214 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 PIBF1Q8WXW3 757 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 ANO2Q9NQ90 1003 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 MYH7BA7E2Y1 1941 aa14.15□□□□□ -0.14
SPG11-219ENST00000559822 A0A0C4DFX4 3053 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 PIK3CDO00329 1044 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 FIBPO43427 364 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 EFCAB14O75071 495 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 IGFBP4P22692 258 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 ICAM3P32942 547 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 HSDL1Q3SXM5 330 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 BMP2KLQ5H9B9 411 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 CREB3L3Q68CJ9 461 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 CENPQQ7L2Z9 268 aaPredicted RBP14.14□□□□□ -0.15
SPG11-219ENST00000559822 INPP4AQ96PE3 977 aaPredicted RBP14.14□□□□□ -0.15
SPG11-219ENST00000559822 CTAGE1Q96RT6 745 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 MYL10Q9BUA6 226 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 SLC12A7Q9Y666 1083 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 UNC80Q8N2C7 3258 aa14.14□□□□□ -0.15
SPG11-219ENST00000559822 CKBP12277 381 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 SP2Q02086 613 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 NECTIN1Q15223 517 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 PCNX4Q63HM2 1172 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 CNKSR3Q6P9H4 555 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 METTL7BQ6UX53 244 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 SYNE3Q6ZMZ3 975 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 NLRX1Q86UT6 975 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 HERC6Q8IVU3 1022 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 USP38Q8NB14 1042 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 GIMAP8Q8ND71 665 aaPredicted RBP14.13□□□□□ -0.15
SPG11-219ENST00000559822 DHX38Q92620 1227 aaKnown RBP14.13□□□□□ -0.15
SPG11-219ENST00000559822 USP26Q9BXU7 913 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 TSPYL2Q9H2G4 693 aaPredicted RBP14.13□□□□□ -0.15
SPG11-219ENST00000559822 MYO9BQ13459 2157 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 EMSYQ7Z589 1322 aa14.13□□□□□ -0.15
SPG11-219ENST00000559822 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
SPG11-219ENST00000559822 SPATA31C2B4DYI2 1134 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 H3BRB1 525 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 SORBS3O60504 671 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 CXCL10P02778 98 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 CA3P07451 260 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 MYOGP15173 224 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 MRPS9P82933 396 aaKnown RBP14.12□□□□□ -0.15
SPG11-219ENST00000559822 TJAP1Q5JTD0 557 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 PPM1EQ8WY54 764 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 CDHR1Q96JP9 859 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 SENP7Q9BQF6 1050 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 C16orf70Q9BSU1 422 aa14.12□□□□□ -0.15
SPG11-219ENST00000559822 TUT1Q9H6E5 874 aaKnown RBP14.12□□□□□ -0.15
SPG11-219ENST00000559822 ZNF215Q9UL58 517 aaPredicted RBP14.12□□□□□ -0.15
SPG11-219ENST00000559822 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 C17orf102A2RUQ5 167 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 MEIS2O14770 477 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 GTPBP6O43824 516 aaPredicted RBP14.11□□□□□ -0.15
SPG11-219ENST00000559822 TLL1O43897 1013 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 PLEKHA8P1O95397 391 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 LGALS2P05162 132 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 GNAT1P11488 350 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 WDR5P61964 334 aaKnown RBP14.11□□□□□ -0.15
SPG11-219ENST00000559822 ADGRE1Q14246 886 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 USP17L6PQ6QN14 398 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 CYFIP1Q7L576 1253 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 SERINC5Q86VE9 423 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 SGMS1Q86VZ5 419 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 SRBD1Q8N5C6 995 aaKnown RBP14.11□□□□□ -0.15
SPG11-219ENST00000559822 FANCBQ8NB91 859 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 ATXN2LQ8WWM7 1075 aaKnown RBP14.11□□□□□ -0.15
SPG11-219ENST00000559822 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
SPG11-219ENST00000559822 PSTPIP2Q9H939 334 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 EHMT1Q9H9B1 1298 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 RTEL1Q9NZ71 1219 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 THEGQ9P2T0 379 aa14.11□□□□□ -0.15
SPG11-219ENST00000559822 SPDYE3A6NKU9 549 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms