RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.63
LRRC28-216ENST00000559819 PCDHA13Q9Y5I0 950 aa11.15□□□□□ -0.63
LRRC28-216ENST00000559819 SPATA31A6Q5VVP1 1343 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 LRRC37AA6NMS7 1700 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 LRRIQ3A6PVS8 624 aaPredicted RBP11.14□□□□□ -0.63
LRRC28-216ENST00000559819 G3V3G9 751 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 CDK17Q00537 523 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 LRRC63Q05C16 580 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 SPA17Q15506 151 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 DCAF8Q5TAQ9 597 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 ANKRD13CQ8N6S4 541 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 BAP1Q92560 729 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 P2RX7Q99572 595 aaKnown RBP11.14□□□□□ -0.63
LRRC28-216ENST00000559819 JADE2Q9NQC1 790 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 DDTLA6NHG4 134 aaPredicted RBP11.14□□□□□ -0.63
LRRC28-216ENST00000559819 EEF2P13639 858 aaKnown RBP11.14□□□□□ -0.63
LRRC28-216ENST00000559819 CRKP46108 304 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 FAM26FQ5R3K3 315 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 GPATCH4Q5T3I0 446 aaKnown RBP11.14□□□□□ -0.63
LRRC28-216ENST00000559819 KIAA0825Q8IV33 1275 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 PROM2Q8N271 834 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 EHBP1Q8NDI1 1231 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 MTMR8Q96EF0 704 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 GDAP1L1Q96MZ0 367 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 PSMB7Q99436 277 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 TSG101Q99816 390 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 IFIH1Q9BYX4 1025 aaKnown RBP11.14□□□□□ -0.63
LRRC28-216ENST00000559819 DEF6Q9H4E7 631 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 VPS18Q9P253 973 aa11.14□□□□□ -0.63
LRRC28-216ENST00000559819 TRAF5O00463 557 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 ONECUT3O60422 494 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-216ENST00000559819 PLA2G4BP0C869 781 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 HNRNPH3P31942 346 aaKnown RBP11.13□□□□□ -0.63
LRRC28-216ENST00000559819 MRPS25P82663 173 aaKnown RBP11.13□□□□□ -0.63
LRRC28-216ENST00000559819 CCDC40Q4G0X9 1142 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 ZCWPW2Q504Y3 356 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 PDXDC1Q6P996 788 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SUGT1Q9Y2Z0 365 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 PCDHA1Q9Y5I3 950 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 NCK2O43639 380 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 AKR1B10O60218 316 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 MED24O75448 989 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 GDF11O95390 407 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SLC1A4P43007 532 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 TUBB4BP68371 445 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 FAM193AP78312 1265 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 GFPT1Q06210 699 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-216ENST00000559819 CDC37Q16543 378 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SLC27A3Q5K4L6 730 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 WDR93Q6P2C0 686 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SH3BP5LQ7L8J4 393 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 TMC4Q7Z404 712 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 CRACR2AQ9BSW2 395 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 ANO3Q9BYT9 981 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 ZHX3Q9H4I2 956 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SH2D4AQ9H788 454 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 EHD2Q9NZN4 543 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 FAN1Q9Y2M0 1017 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 MYH7BA7E2Y1 1941 aa11.13□□□□□ -0.63
LRRC28-216ENST00000559819 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 FGFR1OPO95684 399 aaKnown RBP11.12□□□□□ -0.63
LRRC28-216ENST00000559819 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 RBM5P52756 815 aaKnown RBP eCLIP11.12□□□□□ -0.63
LRRC28-216ENST00000559819 PSMD2Q13200 908 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 SEPT2Q15019 361 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 POTEEQ6S8J3 1075 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 CACNA2D4Q7Z3S7 1137 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 COG1Q8WTW3 980 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
LRRC28-216ENST00000559819 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 ADAM21Q9UKJ8 722 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 COL4A3BPQ9Y5P4 624 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 PHACTR2O75167 634 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 MYBL2P10244 700 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 CXCR5P32302 372 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 TNNT3P45378 269 aaPredicted RBP11.12□□□□□ -0.63
LRRC28-216ENST00000559819 CKAP4Q07065 602 aaKnown RBP11.12□□□□□ -0.63
LRRC28-216ENST00000559819 EZH2Q15910 746 aaKnown RBP11.12□□□□□ -0.63
LRRC28-216ENST00000559819 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 HHIPL2Q6UWX4 724 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 CCDC102AQ96A19 550 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 POLD4Q9HCU8 107 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
LRRC28-216ENST00000559819 MEIS1O00470 390 aa11.11□□□□□ -0.63
LRRC28-216ENST00000559819 BUB1O43683 1085 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms