RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 KRT40Q6A162 431 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 NLRX1Q86UT6 975 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 MXRA8Q9BRK3 442 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 TSEN34Q9BSV6 310 aaKnown RBP23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 C11orf49Q9H6J7 331 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 JADE2Q9NQC1 790 aa23.15■■□□□ 1.3
TSPAN3-207ENST00000559494 FIBPO43427 364 aa23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 GH1P01241 217 aa23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 CUL4AQ13619 759 aa23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 FSCN1Q16658 493 aaKnown RBP23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 GPRASP2Q96D09 838 aa23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 SENP6Q9GZR1 1112 aaPredicted RBP23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 PHF24Q9UPV7 400 aa23.14■■□□□ 1.3
TSPAN3-207ENST00000559494 GUCY1B3Q02153 619 aa23.13■■□□□ 1.29
TSPAN3-207ENST00000559494 CEP55Q53EZ4 464 aa23.13■■□□□ 1.29
TSPAN3-207ENST00000559494 FAM184AQ8NB25 1140 aa23.13■■□□□ 1.29
TSPAN3-207ENST00000559494 SNX21Q969T3 373 aa23.13■■□□□ 1.29
TSPAN3-207ENST00000559494 FERMT2Q96AC1 680 aa23.13■■□□□ 1.29
TSPAN3-207ENST00000559494 MEIS1O00470 390 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 ATP9AO75110 1047 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 MMP1P03956 469 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 ASGR1P07306 291 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 UBA1P22314 1058 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 ZNF76P36508 570 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 ACLYP53396 1101 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 TRIM29Q14134 588 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 CELF3Q5SZQ8 465 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 MYSM1Q5VVJ2 828 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 DHX37Q8IY37 1157 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 PCSK9Q8NBP7 692 aaKnown RBP23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 TBCKQ8TEA7 893 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 AFG1LQ8WV93 481 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 C8orf76Q96K31 380 aa23.12■■□□□ 1.29
TSPAN3-207ENST00000559494 A6NJR5 290 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 BTBD18B2RXH4 712 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 FAM86B1E9PN63 330 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 MAFGO15525 162 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 SORBS3O60504 671 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 GGPS1O95749 300 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 FAM86B2P0C5J1 330 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 ARP10275 920 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 CIITAP33076 1130 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 KRT2P35908 639 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 NR5A1Q13285 461 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 MTMR1Q13613 665 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 LAMC2Q13753 1193 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 EARS2Q5JPH6 523 aaKnown RBP23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 KRT25Q7Z3Z0 450 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 TNFRSF25Q93038 417 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 EMID1Q96A84 441 aaPredicted RBP23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 SENP7Q9BQF6 1050 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 KCNH7Q9NS40 1196 aa23.11■■□□□ 1.29
TSPAN3-207ENST00000559494 IGLV3-22A0A075B6J6 115 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 MOXD2PA6NHM9 499 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 USP11P51784 963 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 NONOQ15233 471 aaKnown RBP eCLIP23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 NIPA1Q7RTP0 329 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 FBXO18Q8NFZ0 1043 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 CDHR1Q96JP9 859 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 PDE4DIPQ5VU43 2346 aa23.1■■□□□ 1.29
TSPAN3-207ENST00000559494 A0A1W2PQ45 241 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 A0A1W2PQY0 241 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 K7ELQ4 463 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 KCNA2P16389 499 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 GJB2P29033 226 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 CPT1AP50416 773 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 MLLT1Q03111 559 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 NEDD9Q14511 834 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 INF2Q27J81 1249 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 CXCL17Q6UXB2 119 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 CYFIP1Q7L576 1253 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 DIS3L2Q8IYB7 885 aaKnown RBP23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 MLXIPQ9HAP2 919 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 SMC3Q9UQE7 1217 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 DOCK5Q9H7D0 1870 aa23.09■■□□□ 1.29
TSPAN3-207ENST00000559494 CCDC194A0A1B0GVG4 234 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 FAM205CA6NFA0 338 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 ZEB2O60315 1214 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 ATN1P54259 1190 aaPredicted RBP23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 PIK3AP1Q6ZUJ8 805 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 PLA2G4DQ86XP0 818 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 BRMS1Q9HCU9 246 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 PKD2L1Q9P0L9 805 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 TELO2Q9Y4R8 837 aa23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 TNRC18O15417 2968 aaPredicted RBP23.08■■□□□ 1.29
TSPAN3-207ENST00000559494 MMP3P08254 477 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 LRRC26Q2I0M4 334 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 HSDL1Q3SXM5 330 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 BRDTQ58F21 947 aaPredicted RBP23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 METTL7BQ6UX53 244 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 SLC39A5Q6ZMH5 540 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 PPTC7Q8NI37 304 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 SPATA33Q96N06 139 aa23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 AGO4Q9HCK5 861 aaKnown RBP23.08■■□□□ 1.28
TSPAN3-207ENST00000559494 MYL3P08590 195 aa23.07■■□□□ 1.28
TSPAN3-207ENST00000559494 PRR16Q569H4 304 aa23.07■■□□□ 1.28
TSPAN3-207ENST00000559494 GIMAP8Q8ND71 665 aaPredicted RBP23.07■■□□□ 1.28
TSPAN3-207ENST00000559494 LENG9Q96B70 501 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms