RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 DNM3Q9UQ16 869 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 MSH4O15457 936 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 MED24O75448 989 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 CDC25BP30305 580 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 PTPN14Q15678 1187 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 FKBP1CQ5VVH2 108 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 SLFN12Q8IYM2 578 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 PANK4Q9NVE7 773 aa12.05□□□□□ -0.48
CSPG4P5-201ENST00000558731 TRAF5O00463 557 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 PSMC6P62333 389 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 TRAF1Q13077 416 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 C9orf131Q5VYM1 1079 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 VSTM4Q8IW00 320 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 WNK4Q96J92 1243 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 BLOC1S4Q9NUP1 217 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 KBTBD4Q9NVX7 518 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 FZD9O00144 591 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 ZBTB39O15060 712 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 CTNND1O60716 968 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 TBCAO75347 108 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 USP11P51784 963 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 CCDC40Q4G0X9 1142 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 SNRNP48Q6IEG0 339 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 MTMR8Q96EF0 704 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 OTUD5Q96G74 571 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 TEPSINQ96N21 525 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 MMRN2Q9H8L6 949 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 SMCHD1A6NHR9 2005 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 FAM170AA1A519 330 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 EDIL3O43854 480 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 CLSTN1O94985 981 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 CLK2P49760 499 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 APOBEC3FQ8IUX4 373 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 ZNF280CQ8ND82 737 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 BANK1Q8NDB2 785 aa12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 NAP1L4Q99733 375 aaKnown RBP12.04□□□□□ -0.48
CSPG4P5-201ENST00000558731 B4DLN1 442 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 ARP10275 920 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 TRERF1Q96PN7 1200 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 NT5C3AQ9H0P0 336 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 INTS13Q9NVM9 706 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 CSADQ9Y600 493 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 OPLAHO14841 1288 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 TRIM21P19474 475 aaKnown RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 CASP14P31944 242 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 HIRAP54198 1017 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 FAM26FQ5R3K3 315 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 ARHGEF16Q5VV41 709 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 BAG1Q99933 345 aaPredicted RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 STK17AQ9UEE5 414 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 WDR46O15213 610 aaKnown RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 TCERG1LQ5VWI1 586 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 ANKRD40Q6AI12 368 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 CCDC65Q8IXS2 484 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 MTMR14Q8NCE2 650 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 SPATA20Q8TB22 786 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 P2RX5Q93086 422 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 DYDC2Q96IM9 177 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 CTAGE1Q96RT6 745 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 NOC4LQ9BVI4 516 aaKnown RBP12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 CUEDC2Q9H467 287 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 ELP3Q9H9T3 547 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 RNF146Q9NTX7 359 aa12.03□□□□□ -0.48
CSPG4P5-201ENST00000558731 PHF20L1A8MW92 1017 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 SREBF1P36956 1147 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 RBL2Q08999 1139 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 SUPT20HL1Q3ZLR7 823 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 EEPD1Q7L9B9 569 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 RMDN3Q96TC7 470 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 TSG101Q99816 390 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 EMILIN3Q9NT22 766 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 KDM3AQ9Y4C1 1321 aa12.02□□□□□ -0.48
CSPG4P5-201ENST00000558731 EML1O00423 815 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 TBC1D12O60347 775 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 ZSCAN20P17040 1043 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 PDIA5Q14554 519 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 CEP55Q53EZ4 464 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 CEP135Q66GS9 1140 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 RNF207Q6ZRF8 634 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 IL31RAQ8NI17 732 aa12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 CNOT6LQ96LI5 555 aaKnown RBP12.02□□□□□ -0.49
CSPG4P5-201ENST00000558731 TAAR1Q96RJ0 339 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms