RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
RABGGTA-205ENST00000558534 SPATA31C2B4DYI2 1134 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 ARVCFO00192 962 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 NOP56O00567 594 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 CTAGE5O15320 804 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 ARIH2O95376 493 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 MYL3P08590 195 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 ZNF76P36508 570 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 SREBF1P36956 1147 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 MCM2P49736 904 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 CLK2P49760 499 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 MRPS9P82933 396 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 ARHGAP1Q07960 439 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 MTMR1Q13613 665 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 CELF3Q5SZQ8 465 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 TYW1BQ6NUM6 668 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 ANKRD33Q7Z3H0 272 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
RABGGTA-205ENST00000558534 PPFIA4O75335 1185 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 GGPS1O95749 300 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 MMP3P08254 477 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 CLTBP09497 229 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 PURAQ00577 322 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 SETQ01105 290 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 PTPN11Q06124 597 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 ITGA7Q13683 1181 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 METTL7BQ6UX53 244 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 CXCL17Q6UXB2 119 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 NIPA1Q7RTP0 329 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 SPATA33Q96N06 139 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 LBHD1Q9BQE6 289 aaPredicted RBP18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 LARP6Q9BRS8 491 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 LLPHQ9BRT6 129 aaKnown RBP18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 TCEAL9Q9UHQ7 104 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 PCDHA4Q9UN74 947 aa18.02■□□□□ 0.48
RABGGTA-205ENST00000558534 SCN10AQ9Y5Y9 1956 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 H0YGN5 161 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 RGS20O76081 388 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 SUPT20HL2P0C7V6 817 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 UBA1P22314 1058 aaKnown RBP18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 TRIM29Q14134 588 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 ME3Q16798 604 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 TRIM60Q495X7 471 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 CEP55Q53EZ4 464 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 DAGLBQ8NCG7 672 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 AFG1LQ8WV93 481 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 JADE2Q9NQC1 790 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 RTEL1Q9NZ71 1219 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 VPS54Q9P1Q0 977 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 KIF3AQ9Y496 699 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 UBIAD1Q9Y5Z9 338 aa18.01■□□□□ 0.47
RABGGTA-205ENST00000558534 PQBP1O60828 265 aaKnown RBP18■□□□□ 0.47
RABGGTA-205ENST00000558534 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
RABGGTA-205ENST00000558534 ARHGAP4P98171 946 aa18■□□□□ 0.47
RABGGTA-205ENST00000558534 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
RABGGTA-205ENST00000558534 NFRKBQ6P4R8 1299 aa18■□□□□ 0.47
RABGGTA-205ENST00000558534 COPS5Q92905 334 aa18■□□□□ 0.47
RABGGTA-205ENST00000558534 MXRA8Q9BRK3 442 aa18■□□□□ 0.47
RABGGTA-205ENST00000558534 ORC3Q9UBD5 711 aaPredicted RBP18■□□□□ 0.47
RABGGTA-205ENST00000558534 DNAH12Q6ZR08 3092 aa18■□□□□ 0.47
RABGGTA-205ENST00000558534 A0A1W2PPC1 479 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 CYP3A4P08684 503 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 CDK7P50613 346 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 TLE2Q04725 743 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 KRT25Q7Z3Z0 450 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 BLIDQ8IZY5 108 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 SLC43A3Q8NBI5 491 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 TNPO1Q92973 898 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 TBC1D32Q96NH3 1257 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 NAP1L4Q99733 375 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 SDF4Q9BRK5 362 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 PRDM5Q9NQX1 630 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 TMEM39AQ9NV64 488 aa17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 ZNF215Q9UL58 517 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-205ENST00000558534 HOXD8P13378 290 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-205ENST00000558534 USP11P51784 963 aa17.98■□□□□ 0.47
RABGGTA-205ENST00000558534 ALG1Q9BT22 464 aa17.98■□□□□ 0.47
RABGGTA-205ENST00000558534 NFASCO94856 1347 aa17.98■□□□□ 0.47
RABGGTA-205ENST00000558534 TMEM63BQ5T3F8 832 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 CYFIP1Q7L576 1253 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 BACH2Q9BYV9 841 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 PDLIM7Q9NR12 457 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 KCNH7Q9NS40 1196 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 TMEM260Q9NX78 707 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 ZMYND8Q9ULU4 1186 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 DOCK5Q9H7D0 1870 aa17.97■□□□□ 0.47
RABGGTA-205ENST00000558534 CCDC194A0A1B0GVG4 234 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 MEIS1O00470 390 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 KIAA0355O15063 1070 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 F2P00734 622 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 RAG1P15918 1043 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 ITGB5P18084 799 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 BMP8BP34820 402 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 NONOQ15233 471 aaKnown RBP eCLIP17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 SAFBQ15424 915 aaKnown RBP eCLIP17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 FAM47CQ5HY64 1035 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
RABGGTA-205ENST00000558534 FAM126BQ8IXS8 530 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms