RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 H7BY64 318 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 MYO1BO43795 1136 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 ZBTB7AO95365 584 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 FAM153BP0C7A2 387 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 LIMS1P48059 325 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 DDX10Q13206 875 aaKnown RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 LSAMPQ13449 338 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 CIAPIN1Q6FI81 312 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 STYK1Q6J9G0 422 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 KCNT2Q6UVM3 1135 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 RSPO2Q6UXX9 243 aaPredicted RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 ZBTB38Q8NAP3 1195 aaPredicted RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 MKL1Q969V6 931 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 DACT3Q96B18 629 aaPredicted RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 TRMT2BQ96GJ1 504 aaKnown RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 TMEM169Q96HH4 297 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 EXOC2Q96KP1 924 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 IPO9Q96P70 1041 aaKnown RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 RNF38Q9H0F5 515 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 IRF2BPLQ9H1B7 796 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 PPARGC1AQ9UBK2 798 aaKnown RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 ASXL2Q76L83 1435 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 SMG6Q86US8 1419 aaKnown RBP4.26□□□□□ -1.73
HERC1-203ENST00000558532 GCC2Q8IWJ2 1684 aa4.26□□□□□ -1.73
HERC1-203ENST00000558532 AQRO60306 1485 aaKnown RBP eCLIP4.25□□□□□ -1.734e-7■■□□□ 12.8
HERC1-203ENST00000558532 PTPN23Q9H3S7 1636 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 RFXAPO00287 272 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 C6orf222P0C671 652 aaPredicted RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 ZSCAN22P10073 491 aaPredicted RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 NCAM1P13591 858 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 PFKLP17858 780 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 IFRD2Q12894 506 aaPredicted RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 SLC9A5Q14940 896 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 TARBP2Q15633 366 aaKnown RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 ZNF385BQ569K4 471 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 FAM209AQ5JX71 171 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 SOGA3Q5TF21 947 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 AMIGO3Q86WK7 504 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 JMYQ8N9B5 988 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 ZSCAN18Q8TBC5 510 aaPredicted RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 DCAF4Q8WV16 495 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 SEC14L1Q92503 715 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 CCDC136Q96JN2 1154 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 SRPK1Q96SB4 655 aaKnown RBP4.25□□□□□ -1.73
HERC1-203ENST00000558532 UACAQ9BZF9 1416 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 OSBPL2Q9H1P3 480 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 CLDND1Q9NY35 253 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 PALD1Q9ULE6 856 aa4.25□□□□□ -1.73
HERC1-203ENST00000558532 KDM2BQ8NHM5 1336 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 HFM1A2PYH4 1435 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 AKNAQ7Z591 1439 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 TRBV23-1A0A0A0MS06 115 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 HTRA3P83110 453 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 CACNB2Q08289 660 aaPredicted RBP4.24□□□□□ -1.73
HERC1-203ENST00000558532 EMC4Q5J8M3 183 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 CNKSR3Q6P9H4 555 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 LBX2Q6XYB7 198 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 MIB1Q86YT6 1006 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 SCUBE1Q8IWY4 988 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 CPA5Q8WXQ8 436 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 KISS1RQ969F8 398 aaPredicted RBP4.24□□□□□ -1.73
HERC1-203ENST00000558532 CHAMP1Q96JM3 812 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 DNAJC7Q99615 494 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 ZFYVE21Q9BQ24 234 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 AP5M1Q9H0R1 490 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 EPB41L1Q9H4G0 881 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 ZNF652Q9Y2D9 606 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 PHLDB1Q86UU1 1377 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 CCDC18Q5T9S5 1454 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 PRDM2Q13029 1718 aa4.24□□□□□ -1.73
HERC1-203ENST00000558532 PCF11O94913 1555 aaKnown RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 NCOA1Q15788 1441 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 TADA3O75528 432 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 C8BP07358 591 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 ANP32AP39687 249 aaKnown RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 AFF3P51826 1226 aaKnown RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 GPR85P60893 370 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 SUMO1P63165 101 aaKnown RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 FOXO4P98177 505 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 DLX2Q07687 328 aaPredicted RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 LONRF2Q1L5Z9 754 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 VWA3BQ502W6 1294 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 MILR1Q7Z6M3 343 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 B3GNT8Q7Z7M8 397 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 SIAH1Q8IUQ4 282 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 SMARCC2Q8TAQ2 1214 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.23□□□□□ -1.73
HERC1-203ENST00000558532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.23□□□□□ -1.73
HERC1-203ENST00000558532 DRC1Q96MC2 740 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 PWWP2AQ96N64 755 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 NOX5Q96PH1 765 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 CDC6Q99741 560 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 JAM3Q9BX67 310 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 COA3Q9Y2R0 106 aaPredicted RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 MRPS23Q9Y3D9 190 aaKnown RBP4.23□□□□□ -1.73
HERC1-203ENST00000558532 TRAF6Q9Y4K3 522 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 FYCO1Q9BQS8 1478 aa4.23□□□□□ -1.73
HERC1-203ENST00000558532 THOC2Q8NI27 1593 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms