RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 STXBP3O00186 592 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 ETV2O00321 342 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 NOP56O00567 594 aaKnown RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 SMAD7O15105 426 aaKnown RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 C1QTNF9P0C862 333 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 TBX4P57082 545 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 CORO7P57737 925 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 ERVFRD-1P60508 538 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 LARP1BQ659C4 914 aaKnown RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 CIAPIN1Q6FI81 312 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 MCF2L2Q86YR7 1114 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 ARHGEF39Q8N4T4 335 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 PRPF38AQ8NAV1 312 aaKnown RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 PMM1Q92871 262 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 JMJD8Q96S16 334 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 MCOLN1Q9GZU1 580 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 PRKAG3Q9UGI9 489 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 ACSL6Q9UKU0 697 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 AKT3Q9Y243 479 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 BACE2Q9Y5Z0 518 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 MIA2Q96PC5 1412 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 CDK12Q9NYV4 1490 aaPredicted RBP5.36□□□□□ -1.55
LRRC28-205ENST00000558248 DEPDC5O75140 1603 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 IQGAP1P46940 1657 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 ROBO1Q9Y6N7 1651 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 CDC42BPBQ9Y5S2 1711 aa5.36□□□□□ -1.55
LRRC28-205ENST00000558248 ITSN2Q9NZM3 1697 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 SYNMO15061 1565 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 FAM135AQ9P2D6 1515 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 A2MP01023 1474 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 TMEM94Q12767 1356 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 SPATA31A6Q5VVP1 1343 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 AURKAO14965 403 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 L1CAMP32004 1257 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 DLG4P78352 724 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 SRSF3P84103 164 aaKnown RBP5.35□□□□□ -1.55
LRRC28-205ENST00000558248 RAB3GAP1Q15042 981 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 KCNA10Q16322 511 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 FXNQ16595 210 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 DPY19L1Q2PZI1 675 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 CABP7Q86V35 215 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 RPUSD2Q8IZ73 545 aaKnown RBP5.35□□□□□ -1.55
LRRC28-205ENST00000558248 BVESQ8NE79 360 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 KCNK12Q9HB15 430 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 CD320Q9NPF0 282 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 DDX56Q9NY93 547 aaKnown RBP5.35□□□□□ -1.55
LRRC28-205ENST00000558248 GABBR1Q9UBS5 961 aa5.35□□□□□ -1.55
LRRC28-205ENST00000558248 SAMD9LQ8IVG5 1584 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 UGGT1Q9NYU2 1555 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 TROQ12816 1431 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-205ENST00000558248 C2orf71A6NGG8 1288 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 NUDT19A8MXV4 375 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 NPIPB6E9PJ23 425 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 RFXAPO00287 272 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 PRC1O43663 620 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 PPFIA4O75335 1185 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 DDAH1O94760 285 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 EFEMP2O95967 443 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 SDHBP21912 280 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 RBM6P78332 1123 aaKnown RBP5.34□□□□□ -1.55
LRRC28-205ENST00000558248 NR1I3Q14994 352 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 LONRF3Q496Y0 759 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 C4orf46Q504U0 113 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 PLEKHG4Q58EX7 1191 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 BICRALQ6AI39 1079 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 LRRC56Q8IYG6 542 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-205ENST00000558248 TMEM52Q8NDY8 209 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 MKL1Q969V6 931 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 TNFRSF12AQ9NP84 129 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 PDLIM7Q9NR12 457 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 GEMIN8Q9NWZ8 242 aaKnown RBP5.34□□□□□ -1.55
LRRC28-205ENST00000558248 TERF2IPQ9NYB0 399 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 LRP2BPQ9P2M1 347 aa5.34□□□□□ -1.55
LRRC28-205ENST00000558248 SMG5Q9UPR3 1016 aaKnown RBP5.34□□□□□ -1.55
LRRC28-205ENST00000558248 RGS12O14924 1447 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 AFF2P51816 1311 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 NPHP3-ACAD11A0A0J9YXS1 232 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 MYOCOSA0A1B0GUC4 107 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 AGRPO00253 132 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 VAMP4O75379 141 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 KCNH1O95259 989 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 PAMP19021 973 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 LINC00310P59036 64 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 YBX1P67809 324 aaKnown RBP5.33□□□□□ -1.56
LRRC28-205ENST00000558248 C6orf15Q6UXA7 325 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-205ENST00000558248 JDP2Q8WYK2 163 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 RELTQ969Z4 430 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 APEX2Q9UBZ4 518 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 SUSD2Q9UGT4 822 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 G3BP2Q9UN86 482 aaKnown RBP5.33□□□□□ -1.56
LRRC28-205ENST00000558248 PHLPP1O60346 1717 aa5.33□□□□□ -1.56
LRRC28-205ENST00000558248 NLRP1Q9C000 1473 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 WASHC2CQ9Y4E1 1318 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 ZC3H13Q5T200 1668 aaKnown RBP5.32□□□□□ -1.56
LRRC28-205ENST00000558248 KIF3BO15066 747 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 SH3BP5O60239 455 aa5.32□□□□□ -1.56
LRRC28-205ENST00000558248 NUAK1O60285 661 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms