RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SIP14410 1827 aa6.11□□□□□ -1.43
SPG11-208ENST00000558155 EMSYQ7Z589 1322 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 NFIBO00712 420 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 ARHGAP33O14559 1287 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 MMP3P08254 477 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 EDNRBP24530 442 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 IRS1P35568 1242 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 SLC16A2P36021 539 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 PSEN2P49810 448 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 RPS6P62753 249 aaKnown RBP6.1□□□□□ -1.43
SPG11-208ENST00000558155 HTRA4P83105 476 aaPredicted RBP6.1□□□□□ -1.43
SPG11-208ENST00000558155 PPARAQ07869 468 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 TCEAL5Q5H9L2 206 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 TTBK2Q6IQ55 1244 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.1□□□□□ -1.43
SPG11-208ENST00000558155 SEPT14Q6ZU15 432 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 CHST3Q7LGC8 479 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 BMP8AQ7Z5Y6 402 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 TMEM192Q8IY95 271 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 MYOCDQ8IZQ8 938 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 RGS22Q8NE09 1264 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 PANK1Q8TE04 598 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 CLEC4DQ8WXI8 215 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 KAT2BQ92831 832 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 EDAQ92838 391 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 PBXIP1Q96AQ6 731 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 GPATCH3Q96I76 525 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 CTAGE1Q96RT6 745 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 YME1L1Q96TA2 773 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 ALG1Q9BT22 464 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 MAF1Q9H063 256 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 EPB41L4AQ9HCS5 686 aaPredicted RBP6.1□□□□□ -1.43
SPG11-208ENST00000558155 IL17RBQ9NRM6 502 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 CLDND1Q9NY35 253 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 HDAC6Q9UBN7 1215 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 DDX19BQ9UMR2 479 aa6.1□□□□□ -1.43
SPG11-208ENST00000558155 COL4A4P53420 1690 aaPredicted RBP6.1□□□□□ -1.43
SPG11-208ENST00000558155 MYH7BA7E2Y1 1941 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 TANC1Q9C0D5 1861 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 RSPH10B2B2RC85 870 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 CCER2I3L3R5 266 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 M0R2C6 588 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 RANBP6O60518 1105 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 PPFIA4O75335 1185 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 RB1P06400 928 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 RSPH10BP0C881 870 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 TOP1P11387 765 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 LAMC2Q13753 1193 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 MFSD10Q14728 455 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 COL19A1Q14993 1142 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 STXBP2Q15833 593 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 LY6KQ17RY6 165 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 TCTN1Q2MV58 587 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 HERC4Q5GLZ8 1057 aaPredicted RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 ZNF618Q5T7W0 954 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 CCDC62Q6P9F0 684 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 SLC30A10Q6XR72 485 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 RPAINQ86UA6 219 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 RNF135Q8IUD6 432 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 SUGP1Q8IWZ8 645 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 DHX37Q8IY37 1157 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 DBF4BQ8NFT6 615 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 NSUN6Q8TEA1 469 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 SEPT8Q92599 483 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 DHX38Q92620 1227 aaKnown RBP6.09□□□□□ -1.43
SPG11-208ENST00000558155 TOP1MTQ969P6 601 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 IWS1Q96ST2 819 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 LMAN2LQ9H0V9 348 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 GPCPD1Q9NPB8 672 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 ZBTB40Q9NUA8 1239 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 MUTYHQ9UIF7 546 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 STK24Q9Y6E0 443 aa6.09□□□□□ -1.43
SPG11-208ENST00000558155 LCTP09848 1927 aa6.09□□□□□ -1.44
SPG11-208ENST00000558155 MICAL3Q7RTP6 2002 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 WDR19Q8NEZ3 1342 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 TMEM221A6NGB7 291 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 M0R296 226 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 STXBP3O00186 592 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 HAS3O00219 553 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 MBTPS2O43462 519 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 SMARCA5O60264 1052 aaPredicted RBP6.08□□□□□ -1.44
SPG11-208ENST00000558155 EIF3JO75822 258 aaKnown RBP6.08□□□□□ -1.44
SPG11-208ENST00000558155 PPP1R37O75864 691 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 UPP2O95045 317 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 ARIH2O95376 493 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 LTBRP36941 435 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 THPOP40225 353 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 NOVP48745 357 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 ARHGAP1Q07960 439 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 KIAA0753Q2KHM9 967 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 CTC1Q2NKJ3 1217 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 PLEKHG4Q58EX7 1191 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 KCNV1Q6PIU1 500 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 TRIM67Q6ZTA4 783 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 FBXO11Q86XK2 927 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
SPG11-208ENST00000558155 FIBCD1Q8N539 461 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms