RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 SNED1Q8TER0 1413 aa8.01□□□□□ -1.13
CLPX-202ENST00000558103 LAMB2P55268 1798 aa8□□□□□ -1.13
CLPX-202ENST00000558103 E9PSI1 815 aa8□□□□□ -1.13
CLPX-202ENST00000558103 A1BGP04217 495 aa8□□□□□ -1.13
CLPX-202ENST00000558103 SRGNP10124 158 aa8□□□□□ -1.13
CLPX-202ENST00000558103 PRKAR2BP31323 418 aa8□□□□□ -1.13
CLPX-202ENST00000558103 CD96P40200 585 aa8□□□□□ -1.13
CLPX-202ENST00000558103 PHACTR4Q8IZ21 702 aa8□□□□□ -1.13
CLPX-202ENST00000558103 CNBD1Q8NA66 436 aa8□□□□□ -1.13
CLPX-202ENST00000558103 BAHD1Q8TBE0 780 aaPredicted RBP8□□□□□ -1.13
CLPX-202ENST00000558103 ZNF622Q969S3 477 aaKnown RBP eCLIP8□□□□□ -1.13
CLPX-202ENST00000558103 HSPA12BQ96MM6 686 aa8□□□□□ -1.13
CLPX-202ENST00000558103 KIF2CQ99661 725 aa8□□□□□ -1.13
CLPX-202ENST00000558103 TAOK3Q9H2K8 898 aa8□□□□□ -1.13
CLPX-202ENST00000558103 GMIPQ9P107 970 aa8□□□□□ -1.13
CLPX-202ENST00000558103 ADGRE2Q9UHX3 823 aa8□□□□□ -1.13
CLPX-202ENST00000558103 ST14Q9Y5Y6 855 aa8□□□□□ -1.13
CLPX-202ENST00000558103 PRAMEF22A3QJZ6 481 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 RGS13O14921 159 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 GBP1P32455 592 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 PIP4K2AP48426 406 aaPredicted RBP7.99□□□□□ -1.13
CLPX-202ENST00000558103 TNNI2P48788 182 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 ST5P78524 1137 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 TNK2Q07912 1038 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 LTBP1Q14766 1721 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 LRRFIP1Q32MZ4 808 aaKnown RBP7.99□□□□□ -1.13
CLPX-202ENST00000558103 ARSHQ5FYA8 562 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 CDKAL1Q5VV42 579 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 CDCP2Q5VXM1 449 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 TRPM7Q96QT4 1865 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 SEMA3GQ9NS98 782 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.99□□□□□ -1.13
CLPX-202ENST00000558103 USP16Q9Y5T5 823 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 THSD7BQ9C0I4 1608 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 PITPNM2Q9BZ72 1349 aa7.99□□□□□ -1.13
CLPX-202ENST00000558103 KLRG2A4D1S0 409 aaPredicted RBP7.98□□□□□ -1.13
CLPX-202ENST00000558103 FUT4P22083 530 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 CLEC4GQ6UXB4 293 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 PIWIL2Q8TC59 973 aaKnown RBP7.98□□□□□ -1.13
CLPX-202ENST00000558103 ZNF428Q96B54 188 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 ATG4CQ96DT6 458 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 MASTLQ96GX5 879 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 Q96M66 194 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 COL4A5P29400 1685 aa7.98□□□□□ -1.13
CLPX-202ENST00000558103 RIC1Q4ADV7 1423 aa7.97□□□□□ -1.13
CLPX-202ENST00000558103 DDNO94850 711 aaPredicted RBP7.97□□□□□ -1.13
CLPX-202ENST00000558103 HSPA1AP0DMV8 641 aaKnown RBP7.97□□□□□ -1.13
CLPX-202ENST00000558103 HSPA1BP0DMV9 641 aaKnown RBP7.97□□□□□ -1.13
CLPX-202ENST00000558103 RAG1P15918 1043 aa7.97□□□□□ -1.13
CLPX-202ENST00000558103 PAK2Q13177 524 aa7.97□□□□□ -1.13
CLPX-202ENST00000558103 CNGB1Q14028 1251 aaPredicted RBP7.97□□□□□ -1.13
CLPX-202ENST00000558103 SOGA3Q5TF21 947 aa7.97□□□□□ -1.13
CLPX-202ENST00000558103 ANGEL2Q5VTE6 544 aaKnown RBP7.97□□□□□ -1.13
CLPX-202ENST00000558103 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
CLPX-202ENST00000558103 ANTXR1Q9H6X2 564 aa7.97□□□□□ -1.13
CLPX-202ENST00000558103 H3BS24 57 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 SNRPA1P09661 255 aaKnown RBP7.96□□□□□ -1.14
CLPX-202ENST00000558103 PPP2R1AP30153 589 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 PLCL1Q15111 1095 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 OVOS1Q6IE37 1185 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 CBLL1Q75N03 491 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 MCM10Q7L590 875 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 THAP5Q7Z6K1 395 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 NBPF5PQ86XG9 351 aaPredicted RBP7.96□□□□□ -1.14
CLPX-202ENST00000558103 PI4K2BQ8TCG2 481 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 TMEM40Q8WWA1 233 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 VWCEQ96DN2 955 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 CFAP53Q96M91 514 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 KREMEN1Q96MU8 473 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 LMCD1Q9NZU5 365 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 ZNF652Q9Y2D9 606 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 PASKQ96RG2 1323 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 ABCC12Q96J65 1359 aa7.96□□□□□ -1.14
CLPX-202ENST00000558103 MEIS3P2A8K0S8 358 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 NPHP1O15259 732 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 HTATSF1O43719 755 aaKnown RBP7.95□□□□□ -1.14
CLPX-202ENST00000558103 LRRN2O75325 713 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 UBOX5O94941 541 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 NPR1P16066 1061 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 IKZF1Q13422 519 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 DCTN1Q14203 1278 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 CCDC93Q567U6 631 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 NLRC3Q7RTR2 1065 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 RTF1Q92541 710 aaKnown RBP7.95□□□□□ -1.14
CLPX-202ENST00000558103 UBE2FQ969M7 185 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
CLPX-202ENST00000558103 ATP13A1Q9HD20 1204 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 ZSWIM5Q9P217 1185 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 NUDCQ9Y266 331 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 ZNF541Q9H0D2 1346 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 CNTNAP1P78357 1384 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 IBTKQ9P2D0 1353 aaPredicted RBP7.95□□□□□ -1.14
CLPX-202ENST00000558103 LRRC37AA6NMS7 1700 aa7.95□□□□□ -1.14
CLPX-202ENST00000558103 TAF1P21675 1872 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 IQCA1LA6NCM1 817 aa7.94□□□□□ -1.14
CLPX-202ENST00000558103 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms