RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 HDAC6Q9UBN7 1215 aa15.78■□□□□ 0.12
TMEM260-215ENST00000557626 BAZ2AQ9UIF9 1905 aaKnown RBP15.78■□□□□ 0.12
TMEM260-215ENST00000557626 C2CD4DB7Z1M9 353 aa15.77■□□□□ 0.12
TMEM260-215ENST00000557626 ASGR2P07307 311 aa15.77■□□□□ 0.12
TMEM260-215ENST00000557626 ALAS1P13196 640 aa15.77■□□□□ 0.12
TMEM260-215ENST00000557626 RBM10P98175 930 aaKnown RBP15.77■□□□□ 0.12
TMEM260-215ENST00000557626 PPM1JQ5JR12 505 aa15.77■□□□□ 0.12
TMEM260-215ENST00000557626 CRIPAKQ8N1N5 446 aa15.77■□□□□ 0.12
TMEM260-215ENST00000557626 P2RX5Q93086 422 aa15.77■□□□□ 0.12
TMEM260-215ENST00000557626 MYH4Q9Y623 1939 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 UNC79Q9P2D8 2635 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 ITGB1P05556 798 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
TMEM260-215ENST00000557626 FDX1P10109 184 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 NPR3P17342 541 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 ALDH5A1P51649 535 aaPredicted RBP15.76■□□□□ 0.11
TMEM260-215ENST00000557626 NSMFQ6X4W1 530 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 SPPL3Q8TCT6 385 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 ATP8B4Q8TF62 1192 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 SCFD2Q8WU76 684 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 ZNF512BQ96KM6 892 aaPredicted RBP15.76■□□□□ 0.11
TMEM260-215ENST00000557626 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
TMEM260-215ENST00000557626 ANGPTL2Q9UKU9 493 aa15.76■□□□□ 0.11
TMEM260-215ENST00000557626 GREB1LQ9C091 1923 aaPredicted RBP15.76■□□□□ 0.11
TMEM260-215ENST00000557626 KIAA1671Q9BY89 1806 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 FSD2A1L4K1 749 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 BCAR3O75815 825 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 SRGAP2BP0DMP2 458 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 THPOP40225 353 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 G3BP1Q13283 466 aaKnown RBP eCLIP15.75■□□□□ 0.11
TMEM260-215ENST00000557626 BTG3Q14201 252 aaPredicted RBP15.75■□□□□ 0.11
TMEM260-215ENST00000557626 SUMF1Q8NBK3 374 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 VN1R2Q8NFZ6 395 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 POF1BQ8WVV4 589 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 KAT2BQ92831 832 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 APOL5Q9BWW9 433 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 S1PR5Q9H228 398 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 NBEAQ8NFP9 2946 aa15.75■□□□□ 0.11
TMEM260-215ENST00000557626 PER2O15055 1255 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 MMP3P08254 477 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 TXNP10599 105 aaKnown RBP15.74■□□□□ 0.11
TMEM260-215ENST00000557626 NAALADL2Q58DX5 795 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 MUM1L1Q5H9M0 696 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 VARS2Q5ST30 1063 aaKnown RBP15.74■□□□□ 0.11
TMEM260-215ENST00000557626 C16orf86Q6ZW13 317 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 ALG1Q9BT22 464 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 RC3H2Q9HBD1 1191 aaKnown RBP15.74■□□□□ 0.11
TMEM260-215ENST00000557626 RCAN3Q9UKA8 241 aa15.74■□□□□ 0.11
TMEM260-215ENST00000557626 LOC102724159A0A0B4J2E5 919 aa15.73■□□□□ 0.11
TMEM260-215ENST00000557626 KINO60870 393 aaKnown RBP15.73■□□□□ 0.11
TMEM260-215ENST00000557626 ZNF200P98182 395 aaPredicted RBP15.73■□□□□ 0.11
TMEM260-215ENST00000557626 PWP2Q15269 919 aaKnown RBP15.73■□□□□ 0.11
TMEM260-215ENST00000557626 TNNI3KQ59H18 835 aa15.73■□□□□ 0.11
TMEM260-215ENST00000557626 AMOTL1Q8IY63 956 aa15.73■□□□□ 0.11
TMEM260-215ENST00000557626 AFG1LQ8WV93 481 aa15.73■□□□□ 0.11
TMEM260-215ENST00000557626 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
TMEM260-215ENST00000557626 ISY1Q9ULR0 285 aaKnown RBP15.73■□□□□ 0.11
TMEM260-215ENST00000557626 FPGT-TNNI3KV9GXZ4 949 aa15.73■□□□□ 0.11
TMEM260-215ENST00000557626 PLXNA4Q9HCM2 1894 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 CYP2D7A0A087X1C5 515 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 SP9P0CG40 484 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
TMEM260-215ENST00000557626 TECP42680 631 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 ANKRD54Q6NXT1 300 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 DHX37Q8IY37 1157 aaKnown RBP15.72■□□□□ 0.11
TMEM260-215ENST00000557626 KLHL23Q8NBE8 558 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 MICAL1Q8TDZ2 1067 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 APBB2Q92870 758 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 CDCA3Q99618 268 aaPredicted RBP15.72■□□□□ 0.11
TMEM260-215ENST00000557626 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.72■□□□□ 0.11
TMEM260-215ENST00000557626 KATNAL1Q9BW62 490 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 FBXL21Q9UKT6 434 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
TMEM260-215ENST00000557626 NAV2Q8IVL1 2488 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 STK25O00506 426 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 PSEN2P49810 448 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 PDE4DQ08499 809 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 DUSP6Q16828 381 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 SIX5Q8N196 739 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 SECISBP2LQ93073 1101 aaKnown RBP15.71■□□□□ 0.11
TMEM260-215ENST00000557626 ANTXR1Q9H6X2 564 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 ERVK-5Q9HDB9 667 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 USP18Q9UMW8 372 aa15.71■□□□□ 0.11
TMEM260-215ENST00000557626 CNOT1A5YKK6 2376 aaKnown RBP15.7■□□□□ 0.1
TMEM260-215ENST00000557626 RFX1P22670 979 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 STAT2P52630 851 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
TMEM260-215ENST00000557626 MTX1Q13505 466 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 MFSD10Q14728 455 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 C12orf60Q5U649 245 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 SYCE2Q6PIF2 218 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 RPAP2Q8IXW5 612 aaPredicted RBP15.7■□□□□ 0.1
TMEM260-215ENST00000557626 LCORLQ8N3X6 602 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 TDRD5Q8NAT2 981 aaKnown RBP15.7■□□□□ 0.1
TMEM260-215ENST00000557626 MEIS3Q99687 375 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 POMKQ9H5K3 350 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 LIMD1Q9UGP4 676 aa15.7■□□□□ 0.1
TMEM260-215ENST00000557626 TNNQ9UQP3 1299 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms