RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RFWD2Q8NHY2 731 aa9.51□□□□□ -0.89
SYNE3-205ENST00000557275 GOLGA8FQ08AF8 430 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 GOLGA8DPQ0D2H9 430 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ZNF653Q96CK0 615 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ZNF839A8K0R7 811 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 TBC1D4O60343 1298 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 RRM2BQ7LG56 351 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 LRRC49Q8IUZ0 686 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 RTL3Q8N8U3 475 aaKnown RBP9.5□□□□□ -0.89
SYNE3-205ENST00000557275 PARD3BQ8TEW8 1205 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 EPC1Q9H2F5 836 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 EML4Q9HC35 981 aaKnown RBP9.5□□□□□ -0.89
SYNE3-205ENST00000557275 RNF103-CHMP3A0A140T963 221 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 STXBP3O00186 592 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 AK2P54819 239 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 CENPPQ6IPU0 288 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 IFNL2Q8IZJ0 200 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ANKRD44Q8N8A2 993 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 DDI1Q8WTU0 396 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 CCDC22O60826 627 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 CUL3Q13618 768 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 PPCSQ9HAB8 311 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 CDC27P30260 824 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 UBN1Q9NPG3 1134 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 GMEB1Q9Y692 573 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 C1orf146Q5VVC0 180 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 SPOPLQ6IQ16 392 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 SIKE1Q9BRV8 207 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 TEX14Q8IWB6 1497 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 RALBP11234 206 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ALCAMQ13740 583 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ZNF556Q9HAH1 456 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 CDC23Q9UJX2 597 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 IMPDH2P12268 514 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 GUCY2DQ02846 1103 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 TMEM132EQ6IEE7 984 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 SLC30A9Q6PML9 568 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 MYOCDQ8IZQ8 938 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 PIK3R2O00459 728 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 MYO1DO94832 1006 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ARL4AP40617 200 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 PURAQ00577 322 aaKnown RBP9.5□□□□□ -0.89
SYNE3-205ENST00000557275 SGO2Q562F6 1265 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 LSG1Q9H089 658 aaKnown RBP9.5□□□□□ -0.89
SYNE3-205ENST00000557275 PIGUQ9H490 435 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ARHGAP31Q2M1Z3 1444 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 AP3B1O00203 1094 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 LRWD1Q9UFC0 647 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 AP4S1Q9Y587 144 aa9.5□□□□□ -0.89
SYNE3-205ENST00000557275 ZFYVE9O95405 1425 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 CDC37Q16543 378 aaPredicted RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 SLC44A4Q53GD3 710 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 KNL1Q8NG31 2342 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 KRT19P08727 400 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 ABCE1P61221 599 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 INPP5AQ14642 412 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 PRUNE1Q86TP1 453 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 DNAAF3Q8N9W5 541 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 PPP2R2CQ9Y2T4 447 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 YWHAHQ04917 246 aaPredicted RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 SYCP2LQ5T4T6 812 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 SLF1Q9BQI6 1058 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 SCAF11Q99590 1463 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 ANGPTL8Q6UXH0 198 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 GCOM2Q9BZD3 368 aaPredicted RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 SAC3D1A6NKF1 404 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 POTEEQ6S8J3 1075 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 NCOA1Q15788 1441 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 H2AFZP0C0S5 128 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 MRPS25P82663 173 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 H2AFVQ71UI9 128 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 ZC3H12CQ9C0D7 883 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 KRCC1Q9NPI7 259 aaPredicted RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 ZBTB21Q9ULJ3 1066 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 CCDC188H7C350 402 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 HSPD1P10809 573 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 CCDC127Q96BQ5 260 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 ECT2Q9H8V3 914 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 SEL1LQ9UBV2 794 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 KDM5AP29375 1690 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 COL4A3BPQ9Y5P4 624 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 INSRP06213 1382 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 PDCLQ13371 301 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 TINF2Q9BSI4 451 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 PDE4DIPQ5VU43 2346 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 EIF2B5Q13144 721 aaKnown RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 MYLK4Q86YV6 388 aaPredicted RBP9.49□□□□□ -0.89
SYNE3-205ENST00000557275 PBXIP1Q96AQ6 731 aa9.49□□□□□ -0.89
SYNE3-205ENST00000557275 FAM107AO95990 144 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 NCF2P19878 526 aaPredicted RBP9.48□□□□□ -0.89
SYNE3-205ENST00000557275 C16orf62Q7Z3J2 963 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 ZFP42Q96MM3 310 aa9.48□□□□□ -0.89
SYNE3-205ENST00000557275 OSBPL9Q96SU4 736 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms