RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 NDUFB5O43674 189 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 ADCY3O60266 1144 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 ECEL1O95672 775 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 HOXB7P09629 217 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 FCGRTP55899 365 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 JAG1P78504 1218 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 RPS26P11Q5JNZ5 115 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-223ENST00000557076 C15orf52Q6ZUT6 534 aaKnown RBP6.07□□□□□ -1.44
SCFD1-223ENST00000557076 ANKRD23Q86SG2 305 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 GLYCTKQ8IVS8 523 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 CERS5Q8N5B7 392 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 TTLL11Q8NHH1 800 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 BCL7CQ8WUZ0 217 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-223ENST00000557076 FAM122AQ96E09 287 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 DEFB118Q96PH6 123 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 ANKRD2Q9GZV1 360 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 VEZTQ9HBM0 779 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 CHPF2Q9P2E5 772 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 CPA4Q9UI42 421 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 ZMYND8Q9ULU4 1186 aaPredicted RBP6.07□□□□□ -1.44
SCFD1-223ENST00000557076 PCDHAC2Q9Y5I4 1007 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 LRRC37AA6NMS7 1700 aa6.07□□□□□ -1.44
SCFD1-223ENST00000557076 SSC5DA1L4H1 1573 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 ADGRA2Q96PE1 1338 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 PDHXO00330 501 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 C8AP07357 584 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 PPP2R1AP30153 589 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 FLT3LGP49771 235 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 PRKCZQ05513 592 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 PPATQ06203 517 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 PPIL2Q13356 520 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 C7orf61Q8IZ16 206 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 CITED4Q96RK1 184 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 CDX2Q99626 313 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-223ENST00000557076 NPHS2Q9NP85 383 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 ZNF70Q9UC06 446 aaPredicted RBP6.06□□□□□ -1.44
SCFD1-223ENST00000557076 GABRQQ9UN88 632 aa6.06□□□□□ -1.44
SCFD1-223ENST00000557076 IRS2Q9Y4H2 1338 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 H3BRB1 525 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 TMPRSS2O15393 492 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 DYNC1LI2O43237 492 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 SLFN14P0C7P3 912 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 IL1R1P14778 569 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 SYN1P17600 705 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 RBM5P52756 815 aaKnown RBP eCLIP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 CNGB1Q14028 1251 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 PLCL1Q15111 1095 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 MAFAQ8NHW3 353 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 DIS3LQ8TF46 1054 aaKnown RBP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 HOOK2Q96ED9 719 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 FAM129BQ96TA1 746 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 DNAJC25Q9H1X3 360 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 ATXN3LQ9H3M9 355 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 TUT1Q9H6E5 874 aaKnown RBP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 PIDD1Q9HB75 910 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 ABCB6Q9NP58 842 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 CWC25Q9NXE8 425 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-223ENST00000557076 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 USTQ9Y2C2 406 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 SNCAIPQ9Y6H5 919 aa6.05□□□□□ -1.44
SCFD1-223ENST00000557076 ZNF646O15015 1829 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 AOX1Q06278 1338 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 F8W031 263 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 PAPLNO95428 1278 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 KLRK1P26718 216 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 IGHMBP2P38935 993 aaKnown RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 TNNI2P48788 182 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 CTSWP56202 376 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 RIPK4P57078 832 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 MOGSQ13724 837 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 ZKSCAN4Q969J2 545 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 MRIQ9BWK5 157 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 TMEM39BQ9GZU3 492 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 C11orf49Q9H6J7 331 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 GREM2Q9H772 168 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 TDRD3Q9H7E2 651 aaKnown RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 KRT82Q9NSB4 513 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 CRIM1Q9NZV1 1036 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 RAPGEFL1Q9UHV5 662 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 OGDHLQ9ULD0 1010 aa6.04□□□□□ -1.44
SCFD1-223ENST00000557076 ARID1BQ8NFD5 2236 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-223ENST00000557076 CLSPNQ9HAW4 1339 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 TMEM238LA0A1B0GVL6 79 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 TCP10L2B9ZVM9 353 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 CXCL11O14625 94 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 ID3Q02535 119 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 ORC1Q13415 861 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 KRT24Q2M2I5 525 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 ZNF792Q3KQV3 632 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 FKBP1CQ5VVH2 108 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 ZNF574Q6ZN55 896 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-223ENST00000557076 WFDC3Q8IUB2 231 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-223ENST00000557076 FAM161BQ96MY7 647 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 WRNIP1Q96S55 665 aa6.03□□□□□ -1.44
SCFD1-223ENST00000557076 PARK7Q99497 189 aaKnown RBP6.03□□□□□ -1.44
SCFD1-223ENST00000557076 MPHOSPH8Q99549 860 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms