RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FRMPD4Q14CM0 1322 aa16.15■□□□□ 0.18
SLIRP-207ENST00000556831 TRIM43BA6NCK2 446 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 STXBP3O00186 592 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 PRPF3O43395 683 aaKnown RBP16.14■□□□□ 0.17
SLIRP-207ENST00000556831 RGS20O76081 388 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 FOSP01100 380 aaPredicted RBP16.14■□□□□ 0.17
SLIRP-207ENST00000556831 CLTBP09497 229 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 TGFB3P10600 412 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 IFNAR1P17181 557 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 GNA11P29992 359 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 PSMC6P62333 389 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 LAMC2Q13753 1193 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 BICD2Q8TD16 824 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 TRIM43Q96BQ3 446 aaPredicted RBP16.14■□□□□ 0.17
SLIRP-207ENST00000556831 CDHR1Q96JP9 859 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 MTG1Q9BT17 334 aaPredicted RBP16.14■□□□□ 0.17
SLIRP-207ENST00000556831 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 PDLIM7Q9NR12 457 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 PIEZO1Q92508 2521 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 GRIN2DO15399 1336 aa16.14■□□□□ 0.17
SLIRP-207ENST00000556831 ARVCFO00192 962 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 FIBPO43427 364 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 SORBS3O60504 671 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 PPFIA3O75145 1194 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 CHMP4BP1P59074 171 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 ITGA7Q13683 1181 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 DGKDQ16760 1214 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 TYW1BQ6NUM6 668 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 CCDC62Q6P9F0 684 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 Q7L0L9 218 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 LARP6Q9BRS8 491 aaKnown RBP16.13■□□□□ 0.17
SLIRP-207ENST00000556831 TMEM39AQ9NV64 488 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 RTEL1Q9NZ71 1219 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 DDX41Q9UJV9 622 aaKnown RBP16.13■□□□□ 0.17
SLIRP-207ENST00000556831 PCDHA6Q9UN73 950 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 ARIH1Q9Y4X5 557 aaPredicted RBP16.13■□□□□ 0.17
SLIRP-207ENST00000556831 PCDHA8Q9Y5H6 950 aa16.13■□□□□ 0.17
SLIRP-207ENST00000556831 LAMA2P24043 3122 aaKnown RBP16.13■□□□□ 0.17
SLIRP-207ENST00000556831 A6NJR5 290 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 NOP56O00567 594 aaKnown RBP16.12■□□□□ 0.17
SLIRP-207ENST00000556831 ADAMTS3O15072 1205 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 DEXIO95424 95 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 GGPS1O95749 300 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 MMP3P08254 477 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 NEK4P51957 841 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 AK2P54819 239 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 ARHGAP1Q07960 439 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 NEDD9Q14511 834 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 LRIT3Q3SXY7 679 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 FAM47CQ5HY64 1035 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 ANKRD33Q7Z3H0 272 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 REXO1Q8N1G1 1221 aaKnown RBP16.12■□□□□ 0.17
SLIRP-207ENST00000556831 AFG1LQ8WV93 481 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 SPATA33Q96N06 139 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 TOX2Q96NM4 488 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 KATNAL1Q9BW62 490 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 ALDH8A1Q9H2A2 487 aaPredicted RBP16.12■□□□□ 0.17
SLIRP-207ENST00000556831 BCAS3Q9H6U6 928 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 RAPGEFL1Q9UHV5 662 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 DOCK5Q9H7D0 1870 aa16.12■□□□□ 0.17
SLIRP-207ENST00000556831 ESYT2A0FGR8 921 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 DTNBO60941 627 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 SEC24BO95487 1268 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 RAG1P15918 1043 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 XBP1P17861 261 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 UBA1P22314 1058 aaKnown RBP16.11■□□□□ 0.17
SLIRP-207ENST00000556831 ZNF76P36508 570 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 PURAQ00577 322 aaKnown RBP16.11■□□□□ 0.17
SLIRP-207ENST00000556831 C8orf34Q49A92 452 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 GIMAP8Q8ND71 665 aaPredicted RBP16.11■□□□□ 0.17
SLIRP-207ENST00000556831 PPTC7Q8NI37 304 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 EMID1Q96A84 441 aaPredicted RBP16.11■□□□□ 0.17
SLIRP-207ENST00000556831 INPP4AQ96PE3 977 aaPredicted RBP16.11■□□□□ 0.17
SLIRP-207ENST00000556831 ANO3Q9BYT9 981 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 UBE2OQ9C0C9 1292 aaKnown RBP16.11■□□□□ 0.17
SLIRP-207ENST00000556831 TELO2Q9Y4R8 837 aa16.11■□□□□ 0.17
SLIRP-207ENST00000556831 CDK7P50613 346 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 NLRP5P59047 1200 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 MRPS9P82933 396 aaKnown RBP16.1■□□□□ 0.17
SLIRP-207ENST00000556831 FAAP100Q0VG06 881 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 MTMR1Q13613 665 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 NTRK3Q16288 839 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 CELF3Q5SZQ8 465 aaKnown RBP16.1■□□□□ 0.17
SLIRP-207ENST00000556831 GPRASP2Q96D09 838 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 NOD1Q9Y239 953 aa16.1■□□□□ 0.17
SLIRP-207ENST00000556831 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 ICAM3P32942 547 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 EPHB4P54760 987 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 SP2Q02086 613 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 JAKMIP3Q5VZ66 844 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 WASF1Q92558 559 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 BADQ92934 168 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 ZMYND12Q9H0C1 365 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 VPS54Q9P1Q0 977 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 TPCN1Q9ULQ1 816 aa16.09■□□□□ 0.17
SLIRP-207ENST00000556831 MYH7BA7E2Y1 1941 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms