RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 MEIS2O14770 477 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 FIBPO43427 364 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 EPB41L2O43491 1005 aaKnown RBP12.41□□□□□ -0.42
XRCC3-216ENST00000556682 RGS20O76081 388 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 PFKMP08237 780 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 CYP2C9P11712 490 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 ICAM3P32942 547 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 HSPA4P34932 840 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 COL9A3Q14050 684 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-216ENST00000556682 PTGISQ16647 500 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 BLOC1S2Q6QNY1 142 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 C16orf59Q7L2K0 433 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 HEATR3Q7Z4Q2 680 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 GIMAP8Q8ND71 665 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-216ENST00000556682 IL31RAQ8NI17 732 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 HERVK_113Q902F9 699 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 KCNB2Q92953 911 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 CDHR1Q96JP9 859 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 JAKMIP1Q96N16 626 aaKnown RBP12.41□□□□□ -0.42
XRCC3-216ENST00000556682 INPP4AQ96PE3 977 aaPredicted RBP12.41□□□□□ -0.42
XRCC3-216ENST00000556682 GLT8D2Q9H1C3 349 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 RTEL1Q9NZ71 1219 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 STXBP5LQ9Y2K9 1186 aa12.41□□□□□ -0.42
XRCC3-216ENST00000556682 FRMPD4Q14CM0 1322 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 SPATA31C2B4DYI2 1134 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 hCG_1984214I3L0E3 225 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 UBA1P22314 1058 aaKnown RBP12.4□□□□□ -0.42
XRCC3-216ENST00000556682 RFC2P35250 354 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 PSEN2P49810 448 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 MRPS9P82933 396 aaKnown RBP12.4□□□□□ -0.42
XRCC3-216ENST00000556682 MFSD10Q14728 455 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 KIAA0753Q2KHM9 967 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 ZNF713Q8N859 430 aaPredicted RBP12.4□□□□□ -0.42
XRCC3-216ENST00000556682 CAGE1Q8TC20 777 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 KAT2BQ92831 832 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 SENP7Q9BQF6 1050 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 ALG1Q9BT22 464 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
XRCC3-216ENST00000556682 UMODL1Q5DID0 1318 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 MYH6P13533 1939 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 hCG_1642624A0A1W2PR95 340 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 MAFGO15525 162 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
XRCC3-216ENST00000556682 F2P00734 622 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 ACTN1P12814 892 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 HOXD8P13378 290 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-216ENST00000556682 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
XRCC3-216ENST00000556682 NAPAP54920 295 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 SP2Q02086 613 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 HSDL1Q3SXM5 330 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 PPP1R18Q6NYC8 613 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 METTL7BQ6UX53 244 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 Q6ZUG5 572 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 ZFP91Q96JP5 570 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-216ENST00000556682 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 USP26Q9BXU7 913 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 GTF2IRD1Q9UHL9 959 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 SNX14Q9Y5W7 946 aa12.39□□□□□ -0.43
XRCC3-216ENST00000556682 V9GY48 417 aaPredicted RBP12.39□□□□□ -0.43
XRCC3-216ENST00000556682 BAZ2BQ9UIF8 2168 aaKnown RBP12.38□□□□□ -0.43
XRCC3-216ENST00000556682 SORBS3O60504 671 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 FOSP01100 380 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-216ENST00000556682 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
XRCC3-216ENST00000556682 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 ZNF286BP0CG31 522 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
XRCC3-216ENST00000556682 RAB30Q15771 203 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 OTOP2Q7RTS6 562 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 AFAP1L1Q8TED9 768 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 GPKOWQ92917 476 aaPredicted RBP eCLIP12.38□□□□□ -0.43
XRCC3-216ENST00000556682 BRF1Q92994 677 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 GPRASP2Q96D09 838 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 SCLYQ96I15 445 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 HDAC6Q9UBN7 1215 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 MSRAQ9UJ68 235 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 PCDHA6Q9UN73 950 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 PCDHA8Q9Y5H6 950 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 SLC4A7Q9Y6M7 1214 aa12.38□□□□□ -0.43
XRCC3-216ENST00000556682 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 ZBBXA8MT70 800 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 H3BRB1 525 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 HAS3O00219 553 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 RPS6KB1P23443 525 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 DNAJB2P25686 324 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 ADCY7P51828 1080 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 APOBRQ0VD83 1088 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 UBE2SQ16763 222 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 WWC2Q6AWC2 1192 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 GDF6Q6KF10 455 aaPredicted RBP12.37□□□□□ -0.43
XRCC3-216ENST00000556682 DEFB128Q7Z7B8 93 aa12.37□□□□□ -0.43
XRCC3-216ENST00000556682 CCDC12Q8WUD4 166 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms