RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MSH4O15457 936 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 ZBTB7AO95365 584 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 EGFRP00533 1210 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 PLA2G4BP0C869 781 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 ERCC3P19447 782 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 BAG6P46379 1132 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 PSMC6P62333 389 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 LRRC55Q6ZSA7 311 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 ZFP91Q96JP5 570 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 PANK4Q9NVE7 773 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 FBXO28Q9NVF7 368 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 KDM3AQ9Y4C1 1321 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 ATAD5Q96QE3 1844 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 A0A1W2PQC6 194 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 CYP11B2P19099 503 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 CASQ1P31415 396 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 UBXN2AP68543 259 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 Q4G0T1 1027 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 ARSHQ5FYA8 562 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 MOXD1Q6UVY6 613 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 ZBED3Q96IU2 234 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 NOC4LQ9BVI4 516 aaKnown RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 TTYH3Q9C0H2 523 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 AGPAT5Q9NUQ2 364 aa11.28□□□□□ -0.6
TMEM260-211ENST00000556648 REXO2Q9Y3B8 237 aaKnown RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
TMEM260-211ENST00000556648 FER1L6Q2WGJ9 1857 aa11.27□□□□□ -0.6
TMEM260-211ENST00000556648 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 WNT10BO00744 389 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 TUBB4AP04350 444 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 ARHGAP25P42331 645 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 DNM2P50570 870 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 TBC1D8BQ0IIM8 1120 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 DGKZQ13574 1117 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 ERCC6LQ2NKX8 1250 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 WDR59Q6PJI9 974 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 CYP26C1Q6V0L0 522 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 CATSPER3Q86XQ3 398 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 TMTC1Q8IUR5 882 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 SLF1Q9BQI6 1058 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 WDR18Q9BV38 432 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 CARD6Q9BX69 1037 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 GOPCQ9HD26 462 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 VAV3Q9UKW4 847 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 TFR2Q9UP52 801 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 PCDHA2Q9Y5H9 948 aa11.27□□□□□ -0.61
TMEM260-211ENST00000556648 EML1O00423 815 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 EPHB6O15197 1021 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 CFBP00751 764 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 SPATA31C1P0DKV0 1188 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 PPP1R2P41236 205 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 FAM26FQ5R3K3 315 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 MTERF4Q7Z6M4 381 aaKnown RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 FAM114A1Q8IWE2 563 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 NELFCDQ8IXH7 590 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 SLFN12Q8IYM2 578 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 DNAJC7Q99615 494 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 NT5C3AQ9H0P0 336 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 RANBP17Q9H2T7 1088 aaKnown RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 BCAS3Q9H6U6 928 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 VCPKMTQ9H867 229 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 RNF216Q9NWF9 866 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 TRIM10Q9UDY6 481 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 CAPN11Q9UMQ6 739 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 IGLV3-22A0A075B6J6 115 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 CIITAP33076 1130 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 CAP2P40123 477 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 PABPC4Q13310 644 aaKnown RBP eCLIP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 MYOCDQ8IZQ8 938 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 AGBL3Q8NEM8 1001 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 GTPBP4Q9BZE4 634 aaKnown RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 SYNPO2Q9UMS6 1093 aa11.26□□□□□ -0.61
TMEM260-211ENST00000556648 LUC7L2Q9Y383 392 aaKnown RBP11.26□□□□□ -0.61
TMEM260-211ENST00000556648 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 FOSP01100 380 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-211ENST00000556648 CASP5P51878 434 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 HERVK_113P62684 666 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 PSMD2Q13200 908 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 VWA3BQ502W6 1294 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 FBXO38Q6PIJ6 1188 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 CCDC155Q8N6L0 562 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 OR8K1Q8NGG5 319 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
TMEM260-211ENST00000556648 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
TMEM260-211ENST00000556648 MRFAP1Q9Y605 127 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms