RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 FAM126BQ8IXS8 530 aa8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 NSUN6Q8TEA1 469 aaKnown RBP8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 SCFD2Q8WU76 684 aa8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 REPIN1Q9BWE0 567 aaKnown RBP8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 AMNQ9BXJ7 453 aa8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 PPP1R12CQ9BZL4 782 aa8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 JMJD4Q9H9V9 463 aa8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 DDX49Q9Y6V7 483 aaKnown RBP8.94□□□□□ -0.98
HNRNPC-226ENST00000556628 KPNA6O60684 536 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 SUPT20HL2P0C7V6 817 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 TXNP10599 105 aaKnown RBP8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 EDNRBP24530 442 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 ITGB8P26012 769 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 SLC19A1P41440 591 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 SMAD3P84022 425 aaKnown RBP8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 SEC23AQ15436 765 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 STXBP2Q15833 593 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 TMEM67Q5HYA8 995 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 CASC1Q6TDU7 716 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 CATIPQ7Z7H3 387 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 STAG2Q8N3U4 1231 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 SAMD3Q8N6K7 520 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 SLC43A3Q8NBI5 491 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 NLRP7Q8WX94 980 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 IWS1Q96ST2 819 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 MTIF3Q9H2K0 278 aaKnown RBP8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 HIPK3Q9H422 1215 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 MTMR10Q9NXD2 777 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 MAD2L2Q9UI95 211 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 TBX21Q9UL17 535 aa8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 RBM8AQ9Y5S9 174 aaKnown RBP8.93□□□□□ -0.98
HNRNPC-226ENST00000556628 KIAA1217Q5T5P2 1943 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 ZBTB5O15062 677 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 CD4P01730 458 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 OATP04181 439 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 DNAJB2P25686 324 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 PURAQ00577 322 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 GRM4Q14833 912 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 FAM47CQ5HY64 1035 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 TMEM63BQ5T3F8 832 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 PSRC1Q6PGN9 363 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 BLOC1S3Q6QNY0 202 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 CENPQQ7L2Z9 268 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 HOMER1Q86YM7 354 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 SLC17A8Q8NDX2 589 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 IL27Q8NEV9 243 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 SYTL5Q8TDW5 730 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 TBC1D5Q92609 795 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 MAP4K1Q92918 833 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 TAAR1Q96RJ0 339 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 RMDN3Q96TC7 470 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 MTG1Q9BT17 334 aaPredicted RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 PPP4R2Q9NY27 417 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 MAP3K20Q9NYL2 800 aaKnown RBP8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 STXBP5LQ9Y2K9 1186 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 PCDHA1Q9Y5I3 950 aa8.92□□□□□ -0.98
HNRNPC-226ENST00000556628 PALM3A6NDB9 673 aaPredicted RBP8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 CCDC69A6NI79 296 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 GH1P01241 217 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 CSF2RAP15509 400 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 EIF2AK2P19525 551 aaKnown RBP8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 PTGS1P23219 599 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 KIF5BP33176 963 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 EPHB4P54760 987 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 PSMC6P62333 389 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 NFXL1Q6ZNB6 911 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 SEPT14Q6ZU15 432 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 CHST3Q7LGC8 479 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 TMTC2Q8N394 836 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 CTCFLQ8NI51 663 aaPredicted RBP8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.91□□□□□ -0.982e-8■■■□□ 14.8
HNRNPC-226ENST00000556628 MTA3Q9BTC8 594 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 RIOX1Q9H6W3 641 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 NOD1Q9Y239 953 aa8.91□□□□□ -0.98
HNRNPC-226ENST00000556628 GRIN2DO15399 1336 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 TMEM265A0A087WTH1 108 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 PNMA6FA0A0J9YX94 578 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 A6NJR5 290 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 B4GALT4O60513 344 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 EIF3JO75822 258 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 FGBP02675 491 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 NR3C2P08235 984 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 MYCLP12524 364 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 CASTP20810 708 aaKnown RBP8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 CYP2C18P33260 490 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 MCM5P33992 734 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 GNAQP50148 359 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 HSD17B4P51659 736 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 CHMP4BP1P59074 171 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 PTPN11Q06124 597 aaPredicted RBP8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 LY6KQ17RY6 165 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 TMEM240Q5SV17 173 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 RNF20Q5VTR2 975 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 KCNV1Q6PIU1 500 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 STOX1Q6ZVD7 989 aa8.9□□□□□ -0.98
HNRNPC-226ENST00000556628 RPUSD2Q8IZ73 545 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms