RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 HOOK3Q86VS8 718 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 RAB11FIP4Q86YS3 637 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 NLGN1Q8N2Q7 840 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.88□□□□□ -1.31
TDP1-215ENST00000556498 RNF10Q8N5U6 811 aaKnown RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 ZBTB8BQ8NAP8 495 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 SPC24Q8NBT2 197 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 FLCNQ8NFG4 579 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SPATA18Q8TC71 538 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ACDQ96AP0 544 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ZNF775Q96BV0 537 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 ASIC4Q96FT7 647 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 MOGAT1Q96PD6 335 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 OSMRQ99650 979 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 ZKSCAN3Q9BRR0 538 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 UQCC2Q9BRT2 126 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SUV39H2Q9H5I1 410 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 MRS2Q9HD23 443 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
TDP1-215ENST00000556498 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SEPT11Q9NVA2 429 aaKnown RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 DZANK1Q9NVP4 752 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 IL1RAPL1Q9NZN1 696 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 SLC6A14Q9UN76 642 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 NUDCQ9Y266 331 aa6.88□□□□□ -1.31
TDP1-215ENST00000556498 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.88□□□□□ -1.31
TDP1-215ENST00000556498 KTN1Q86UP2 1357 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 EME2A4GXA9 379 aaPredicted RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 NFKBIEO00221 500 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 ZEB2O60315 1214 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 COBLO75128 1261 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 TRPA1O75762 1119 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 WFS1O76024 890 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 VIMP08670 466 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 SLURP2P0DP57 97 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 HSPA8P11142 646 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 SFTPCP11686 197 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 ACPPP15309 386 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 ZNF76P36508 570 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 MAGEA10P43363 369 aaPredicted RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 CTCFP49711 727 aaPredicted RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 MXI1P50539 228 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 AP2B1P63010 937 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 KIF5AQ12840 1032 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 STIM1Q13586 685 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 GRM2Q14416 872 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 KIF22Q14807 665 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 KLHL40Q2TBA0 621 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 TMEM95Q3KNT9 176 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 MEX3CQ5U5Q3 659 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 ARMC3Q5W041 872 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 NLRP9Q7RTR0 991 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 DGLUCYQ7Z3D6 616 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 PPFIBP1Q86W92 1011 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 GAS2L3Q86XJ1 694 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 LSMEM2Q8N112 164 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 CCAR2Q8N163 923 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 CRACR2BQ8N4Y2 399 aaPredicted RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 LINC00469Q8N7U9 141 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 DHX38Q92620 1227 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 SNX21Q969T3 373 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 CGREF1Q99674 301 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 GORASP1Q9BQQ3 440 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.87□□□□□ -1.31
TDP1-215ENST00000556498 IER2Q9BTL4 223 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 HERC2P3Q9BVR0 1158 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 RTFDC1Q9BY42 306 aaPredicted RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 UPF3BQ9BZI7 483 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 TRIM5Q9C035 493 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 OSBPL5Q9H0X9 879 aaPredicted RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 CYP4F11Q9HBI6 524 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 RIC8AQ9NPQ8 531 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 FKBP14Q9NWM8 211 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 MIS18AQ9NYP9 233 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 DSEQ9UL01 958 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 CCPG1Q9ULG6 757 aa6.87□□□□□ -1.31
TDP1-215ENST00000556498 SCAF8Q9UPN6 1271 aaKnown RBP6.87□□□□□ -1.31
TDP1-215ENST00000556498 ZMYM3Q14202 1370 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 TADA3O75528 432 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 BAIAP3O94812 1187 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 MBD4O95243 580 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 GHRHP01286 108 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 CCDC166P0CW27 439 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 CPB1P15086 417 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 ALOX15P16050 662 aaPredicted RBP6.86□□□□□ -1.31
TDP1-215ENST00000556498 ATP5JP18859 108 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 S100A1P23297 94 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 GBP2P32456 591 aaPredicted RBP6.86□□□□□ -1.31
TDP1-215ENST00000556498 CSTF2P33240 577 aaKnown RBP eCLIP6.86□□□□□ -1.31
TDP1-215ENST00000556498 GMPRP36959 345 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 CLCN2P51788 898 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 COPAP53621 1224 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 PMS2P54278 862 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 AMPD3Q01432 767 aa6.86□□□□□ -1.31
TDP1-215ENST00000556498 DPYSQ14117 519 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms