RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ZDHHC15Q96MV8 337 aa6.55□□□□□ -1.36
SRP54-211ENST00000556445 FCRL3Q96P31 734 aaPredicted RBP6.55□□□□□ -1.36
SRP54-211ENST00000556445 ZNF552Q9H707 407 aaPredicted RBP6.55□□□□□ -1.36
SRP54-211ENST00000556445 DIS3Q9Y2L1 958 aaKnown RBP6.55□□□□□ -1.36
SRP54-211ENST00000556445 SF3B6Q9Y3B4 125 aaKnown RBP6.55□□□□□ -1.36
SRP54-211ENST00000556445 KNSTRNQ9Y448 316 aa6.55□□□□□ -1.36
SRP54-211ENST00000556445 MRPL42Q9Y6G3 142 aaKnown RBP6.55□□□□□ -1.36
SRP54-211ENST00000556445 SPATA31D1Q6ZQQ2 1576 aa6.55□□□□□ -1.36
SRP54-211ENST00000556445 DISP3Q9P2K9 1392 aa6.55□□□□□ -1.36
SRP54-211ENST00000556445 NPC1L1Q9UHC9 1359 aa6.55□□□□□ -1.36
SRP54-211ENST00000556445 TMEM131LA2VDJ0 1609 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 A0A1W2PQ45 241 aaPredicted RBP6.54□□□□□ -1.36
SRP54-211ENST00000556445 A0A1W2PQY0 241 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 FGF10O15520 208 aaPredicted RBP6.54□□□□□ -1.36
SRP54-211ENST00000556445 C1QTNF9P0C862 333 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 PNLIPP16233 465 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 RAP1GAPP47736 663 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 HEATR6Q6AI08 1181 aaKnown RBP6.54□□□□□ -1.36
SRP54-211ENST00000556445 GALNT18Q6P9A2 607 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 ZNF513Q8N8E2 541 aaPredicted RBP6.54□□□□□ -1.36
SRP54-211ENST00000556445 EVI5LQ96CN4 794 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 FGD4Q96M96 766 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 SLC26A8Q96RN1 970 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 JMJD8Q96S16 334 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 MCMBPQ9BTE3 642 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 MCOLN1Q9GZU1 580 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 IFT57Q9NWB7 429 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 TERF2IPQ9NYB0 399 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 TAF6LQ9Y6J9 622 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 CLTCQ00610 1675 aaKnown RBP6.54□□□□□ -1.36
SRP54-211ENST00000556445 INSRP06213 1382 aa6.54□□□□□ -1.36
SRP54-211ENST00000556445 A0A0U1RQG5 324 aaPredicted RBP6.53□□□□□ -1.36
SRP54-211ENST00000556445 WTIPA6NIX2 430 aaPredicted RBP6.53□□□□□ -1.36
SRP54-211ENST00000556445 ETV2O00321 342 aaPredicted RBP6.53□□□□□ -1.36
SRP54-211ENST00000556445 CREB3O43889 395 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 PEX10O60683 326 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 MED14OSP0DP75 135 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 IFNGR1P15260 489 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 PDE6BP35913 854 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 ARID5AQ03989 594 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 FZD5Q13467 585 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 BMS1Q14692 1282 aaKnown RBP6.53□□□□□ -1.36
SRP54-211ENST00000556445 PPP2R5DQ14738 602 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 KIAA1211LQ6NV74 962 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 VHLLQ6RSH7 139 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 ZNF605Q86T29 641 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 SGSM3Q96HU1 749 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 GBP3Q9H0R5 595 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 GABBR1Q9UBS5 961 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 CGGBP1Q9UFW8 167 aaPredicted RBP6.53□□□□□ -1.36
SRP54-211ENST00000556445 ACSL6Q9UKU0 697 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 PARD3Q8TEW0 1356 aa6.53□□□□□ -1.36
SRP54-211ENST00000556445 ADGRB1O14514 1584 aa6.52□□□□□ -1.36
SRP54-211ENST00000556445 ZBED9Q6R2W3 1325 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 OR14I1A6ND48 311 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
SRP54-211ENST00000556445 PPFIA4O75335 1185 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 CD3EP07766 207 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 FGRP09769 529 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 GLDCP23378 1020 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 NOP2P46087 812 aaKnown RBP6.52□□□□□ -1.37
SRP54-211ENST00000556445 ERVFRD-1P60508 538 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 POU4F1Q01851 419 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 ADGRF1Q5T601 910 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 FILIP1Q7Z7B0 1213 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 VPS37DQ86XT2 251 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 FAM9BQ8IZU0 186 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 ARHGEF39Q8N4T4 335 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 PANK3Q9H999 370 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 CD320Q9NPF0 282 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 IMPACTQ9P2X3 320 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 MRVI1Q9Y6F6 885 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 NINLQ9Y2I6 1382 aa6.52□□□□□ -1.37
SRP54-211ENST00000556445 EVC2Q86UK5 1308 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 ASXL1Q8IXJ9 1541 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 HMGB1P1B2RPK0 211 aaPredicted RBP6.51□□□□□ -1.37
SRP54-211ENST00000556445 NFIBO00712 420 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 ENPP3O14638 875 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 PPM1BO75688 479 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 TMEM253P0C7T8 217 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 PRKCAP17252 672 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 SDHBP21912 280 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 RCSD1Q6JBY9 416 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 CYP2R1Q6VVX0 501 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 NAT16Q8N8M0 369 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 STAG1Q8WVM7 1258 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 RCC1LQ96I51 464 aaKnown RBP6.51□□□□□ -1.37
SRP54-211ENST00000556445 PTCHD1Q96NR3 888 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 DDX56Q9NY93 547 aaKnown RBP6.51□□□□□ -1.37
SRP54-211ENST00000556445 APEX2Q9UBZ4 518 aa6.51□□□□□ -1.37
SRP54-211ENST00000556445 MYO5BQ9ULV0 1848 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 QRICH2Q9H0J4 1663 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 A2ML1A8K2U0 1454 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 TNRQ92752 1358 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 TEX51A0A1B0GUA7 166 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 ANKRD34BA5PLL1 514 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 HRKO00198 91 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 AURKAO14965 403 aa6.5□□□□□ -1.37
SRP54-211ENST00000556445 SEMA7AO75326 666 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms