RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 FLT3LGP49771 235 aa11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 U2AF1L4Q8WU68 220 aaKnown RBP11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 FOXD4L4Q8WXT5 416 aaPredicted RBP11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 PICK1Q9NRD5 415 aa11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 HDAC5Q9UQL6 1122 aa11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 ZSWIM8A7E2V4 1837 aa11.07□□□□□ -0.64
GTF2A1-204ENST00000556268 RFX7Q2KHR2 1363 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 DDX3YO15523 660 aaKnown RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 ADCY3O60266 1144 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 ADAM11O75078 769 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 MAP4K4O95819 1239 aaPredicted RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 NEFLP07196 543 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 CT47B1P0C2W7 299 aaPredicted RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 UBTFL1P0CB47 393 aaPredicted RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 RHBDL3P58872 404 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 VN1R5Q7Z5H4 357 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 ZNF384Q8TF68 577 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 SLC7A3Q8WY07 619 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 WNT8BQ93098 351 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 KLHDC7BQ96G42 594 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 HTATIP2Q9BUP3 242 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 RBCK1Q9BYM8 510 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 SIL1Q9H173 461 aa11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 DDX4Q9NQI0 724 aaKnown RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 PAK6Q9NQU5 681 aaPredicted RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 NOB1Q9ULX3 412 aaKnown RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 PA2G4Q9UQ80 394 aaKnown RBP11.06□□□□□ -0.64
GTF2A1-204ENST00000556268 A0A1W2PP55 124 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 METTL12A8MUP2 240 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 RASGRF1Q13972 1273 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 SPTY2D1Q68D10 685 aaPredicted RBP11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 Q6ZS46 218 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 ACAD11Q709F0 780 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 UBASH3BQ8TF42 649 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 GJD2Q9UKL4 321 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 NR2E3Q9Y5X4 410 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 IVNS1ABPQ9Y6Y0 642 aa11.05□□□□□ -0.64
GTF2A1-204ENST00000556268 CPNE3O75131 537 aaKnown RBP11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 MECOMQ03112 1051 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 MTX1Q13505 466 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 HGSNATQ68CP4 663 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 ARHGAP45Q92619 1136 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 DMRTB1Q96MA1 342 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 NIF3L1Q9GZT8 377 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 NPHS2Q9NP85 383 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 OSGEPQ9NPF4 335 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 SMC4Q9NTJ3 1288 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 AGTPBP1Q9UPW5 1226 aa11.04□□□□□ -0.64
GTF2A1-204ENST00000556268 A0A1W2PPC1 479 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 FARP2O94887 1054 aaPredicted RBP11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 TFRCP02786 760 aaKnown RBP11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 H2AFB1P0C5Y9 115 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 KCNA1Q09470 495 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 GADL1Q6ZQY3 521 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 ZSCAN29Q8IWY8 852 aaPredicted RBP11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 MEIS3Q99687 375 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 API5Q9BZZ5 524 aaKnown RBP11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 OSBPL5Q9H0X9 879 aaPredicted RBP11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 LIN7BQ9HAP6 207 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 DCTN4Q9UJW0 460 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 AKAP2Q9Y2D5 859 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 MROH7-TTC4A0A0A0MT08 1334 aa11.03□□□□□ -0.64
GTF2A1-204ENST00000556268 A0A1B0GUL7 405 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TRIM75PA6NK02 468 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 EIF1AYO14602 144 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TNPO2O14787 897 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 LDHCP07864 332 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 GLB1P16278 677 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 BTDP43251 543 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 NLRP12P59046 1061 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TFCP2Q12800 502 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 SPP2Q13103 211 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 IKBKEQ14164 716 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 MVPQ14764 893 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 DUOXA2Q1HG44 320 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 KIAA1211Q6ZU35 1233 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TMC7Q7Z402 723 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 METTL16Q86W50 562 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 DZIP1Q86YF9 867 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 CCNJLQ8IV13 435 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 ANKRD13CQ8N6S4 541 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 COA7Q96BR5 231 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 ALKBH8Q96BT7 664 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 NSUN4Q96CB9 384 aaKnown RBP11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 DEFB118Q96PH6 123 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TCF12Q99081 682 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 TRAIPQ9BWF2 469 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 HMG20BQ9P0W2 317 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 DOCK3Q8IZD9 2030 aa11.02□□□□□ -0.65
GTF2A1-204ENST00000556268 AK9Q5TCS8 1911 aa11.01□□□□□ -0.65
GTF2A1-204ENST00000556268 BMP8BP34820 402 aa11.01□□□□□ -0.65
GTF2A1-204ENST00000556268 CAP2P40123 477 aa11.01□□□□□ -0.65
GTF2A1-204ENST00000556268 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
GTF2A1-204ENST00000556268 FAM110CQ1W6H9 321 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms