RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ADCY4Q8NFM4 1077 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 NEU4Q8WWR8 484 aaPredicted RBP5.86□□□□□ -1.47
SRP54-207ENST00000555535 VOPP1Q96AW1 172 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 RCC1LQ96I51 464 aaKnown RBP5.86□□□□□ -1.47
SRP54-207ENST00000555535 ZSWIM3Q96MP5 696 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 FERD3LQ96RJ6 166 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 DTLQ9NZJ0 730 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 SLC12A7Q9Y666 1083 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 SLC4A7Q9Y6M7 1214 aa5.86□□□□□ -1.47
SRP54-207ENST00000555535 CHGBP05060 677 aa5.85□□□□□ -1.47
SRP54-207ENST00000555535 ADH4P08319 380 aa5.85□□□□□ -1.47
SRP54-207ENST00000555535 ADAT2Q7Z6V5 191 aaKnown RBP5.85□□□□□ -1.47
SRP54-207ENST00000555535 MRGPRGQ86SM5 289 aa5.85□□□□□ -1.47
SRP54-207ENST00000555535 ARHGEF39Q8N4T4 335 aa5.85□□□□□ -1.47
SRP54-207ENST00000555535 RBBP8NLQ8NC74 664 aaPredicted RBP5.85□□□□□ -1.47
SRP54-207ENST00000555535 KLHL25Q9H0H3 589 aa5.85□□□□□ -1.47
SRP54-207ENST00000555535 DLL4Q9NR61 685 aa5.85□□□□□ -1.47
SRP54-207ENST00000555535 CGGBP1Q9UFW8 167 aaPredicted RBP5.85□□□□□ -1.47
SRP54-207ENST00000555535 GTF2A2P52657 109 aa5.84□□□□□ -1.47
SRP54-207ENST00000555535 KIAA0825Q8IV33 1275 aa5.84□□□□□ -1.47
SRP54-207ENST00000555535 TEX2Q8IWB9 1127 aa5.84□□□□□ -1.47
SRP54-207ENST00000555535 DPF3Q92784 378 aa5.84□□□□□ -1.47
SRP54-207ENST00000555535 EXTL1Q92935 676 aa5.84□□□□□ -1.47
SRP54-207ENST00000555535 GNRHR2Q96P88 292 aa5.84□□□□□ -1.47
SRP54-207ENST00000555535 ZYXQ15942 572 aaKnown RBP5.83□□□□□ -1.48
SRP54-207ENST00000555535 IQCEQ6IPM2 695 aa5.83□□□□□ -1.48
SRP54-207ENST00000555535 TEPPQ6URK8 271 aa5.83□□□□□ -1.48
SRP54-207ENST00000555535 CLEC1BQ9P126 229 aa5.83□□□□□ -1.48
SRP54-207ENST00000555535 X6R8D5 127 aa5.83□□□□□ -1.48
SRP54-207ENST00000555535 HGSO14964 777 aaPredicted RBP5.82□□□□□ -1.48
SRP54-207ENST00000555535 PLS3P13797 630 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 MAKP20794 623 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 ZNF568Q3ZCX4 644 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 AGBL4Q5VU57 503 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 Q6ZUG5 572 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 FBXO33Q7Z6M2 555 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 LDLRAD3Q86YD5 345 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 C1orf210Q8IVY1 113 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 Q8N1Y9 231 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 CRACR2BQ8N4Y2 399 aaPredicted RBP5.82□□□□□ -1.48
SRP54-207ENST00000555535 COPS5Q92905 334 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 FAM89AQ96GI7 184 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 PRRX2Q99811 253 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 PHAXQ9H814 394 aaKnown RBP5.82□□□□□ -1.48
SRP54-207ENST00000555535 BTG4Q9NY30 223 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 HSPBP1Q9NZL4 362 aa5.82□□□□□ -1.48
SRP54-207ENST00000555535 COA3Q9Y2R0 106 aaPredicted RBP5.82□□□□□ -1.48
SRP54-207ENST00000555535 RPL11P62913 178 aaKnown RBP5.81□□□□□ -1.48
SRP54-207ENST00000555535 GNPTABQ3T906 1256 aa5.81□□□□□ -1.48
SRP54-207ENST00000555535 TRMT2BQ96GJ1 504 aaKnown RBP5.81□□□□□ -1.48
SRP54-207ENST00000555535 AJUBAQ96IF1 538 aa5.81□□□□□ -1.48
SRP54-207ENST00000555535 LRRC37BQ96QE4 947 aa5.81□□□□□ -1.48
SRP54-207ENST00000555535 SPON2Q9BUD6 331 aa5.81□□□□□ -1.48
SRP54-207ENST00000555535 TMEFF2Q9UIK5 374 aaPredicted RBP5.81□□□□□ -1.48
SRP54-207ENST00000555535 TIMM13Q9Y5L4 95 aaPredicted RBP5.81□□□□□ -1.48
SRP54-207ENST00000555535 U2SURPO15042 1029 aaKnown RBP5.8□□□□□ -1.48
SRP54-207ENST00000555535 CSRP2Q16527 193 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 MBLAC2Q68D91 279 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 TAX1BP1Q86VP1 789 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 REXO1L1PQ8IX06 675 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 CACTINQ8WUQ7 758 aaKnown RBP5.8□□□□□ -1.48
SRP54-207ENST00000555535 PLEKHG4BQ96PX9 1271 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 AURKAIP1Q9NWT8 199 aaPredicted RBP5.8□□□□□ -1.48
SRP54-207ENST00000555535 SUGT1Q9Y2Z0 365 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 PCDHB4Q9Y5E5 795 aa5.8□□□□□ -1.48
SRP54-207ENST00000555535 MYO1BO43795 1136 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 RAD17O75943 681 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 KLHL18O94889 574 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 EPHX1P07099 455 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 ACO1P21399 889 aaKnown RBP5.79□□□□□ -1.48
SRP54-207ENST00000555535 SLC7A5Q01650 507 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 TUBA3CQ13748 450 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 FBXW10Q5XX13 1052 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 TUBA3EQ6PEY2 450 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 POMZP3Q6PJE2 187 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 POLNQ7Z5Q5 900 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 NUDT10Q8NFP7 164 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 NUDT11Q96G61 164 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 TRAIPQ9BWF2 469 aa5.79□□□□□ -1.48
SRP54-207ENST00000555535 COL6A1P12109 1028 aa5.78□□□□□ -1.48
SRP54-207ENST00000555535 DGCR2P98153 550 aa5.78□□□□□ -1.48
SRP54-207ENST00000555535 SMAD2Q15796 467 aaKnown RBP5.78□□□□□ -1.48
SRP54-207ENST00000555535 CEP68Q76N32 757 aa5.78□□□□□ -1.48
SRP54-207ENST00000555535 ZNF483Q8TF39 744 aaPredicted RBP5.78□□□□□ -1.48
SRP54-207ENST00000555535 NEIL1Q96FI4 390 aaPredicted RBP5.78□□□□□ -1.48
SRP54-207ENST00000555535 DMRT1Q9Y5R6 373 aa5.78□□□□□ -1.48
SRP54-207ENST00000555535 SLC30A1Q9Y6M5 507 aa5.78□□□□□ -1.48
SRP54-207ENST00000555535 TCRBV5S2A0A599 114 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 MAFKO60675 156 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 LRG1P02750 347 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 FPR2P25090 351 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 ACRV1P26436 265 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 DNAJA1P31689 397 aaKnown RBP5.77□□□□□ -1.49
SRP54-207ENST00000555535 RAC3P60763 192 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 SCRN1Q12765 414 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 EMC4Q5J8M3 183 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 FUKQ8N0W3 1084 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 PHOSPHO1Q8TCT1 267 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 TMEM169Q96HH4 297 aa5.77□□□□□ -1.49
SRP54-207ENST00000555535 FGD4Q96M96 766 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms