RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 ME3Q16798 604 aa11.55□□□□□ -0.56
HNRNPC-219ENST00000555309 Q6ZUG5 572 aa11.55□□□□□ -0.56
HNRNPC-219ENST00000555309 LARP6Q9BRS8 491 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-219ENST00000555309 TPCN1Q9ULQ1 816 aa11.55□□□□□ -0.56
HNRNPC-219ENST00000555309 KIAA1217Q5T5P2 1943 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 A0A1W2PPC1 479 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 ADAMTS3O15072 1205 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 EIF3JO75822 258 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 LARGE1O95461 756 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 CYP2C9P11712 490 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 ADD1P35611 737 aaKnown RBP11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 NBPF20Q3BBV1 942 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 NAP1L2Q9ULW6 460 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 SMC3Q9UQE7 1217 aa11.54□□□□□ -0.56
HNRNPC-219ENST00000555309 FSD2A1L4K1 749 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 ZBTB43O43298 467 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 DTNBO60941 627 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 TIMP1P01033 207 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 MMP3P08254 477 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 ACRP10323 421 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 CSF2RAP15509 400 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 SMARCA1P28370 1054 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 CPT1AP50416 773 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 SEMA3FQ13275 785 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 LRIT3Q3SXY7 679 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 WWC2Q6AWC2 1192 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 KAT2BQ92831 832 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 BRF1Q92994 677 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 MPHOSPH6Q99547 160 aaKnown RBP11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 LMBRD1Q9NUN5 540 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 MRVI1Q9Y6F6 885 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 V9GY48 417 aaPredicted RBP11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 CNTNAP5Q8WYK1 1306 aa11.53□□□□□ -0.56
HNRNPC-219ENST00000555309 GOLGA8AA7E2F4 631 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 B4DLN1 442 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 ZEB2O60315 1214 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 CABYRO75952 493 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 GH1P01241 217 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 CALM1P0DP23 149 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 CALM2P0DP24 149 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 CALM3P0DP25 149 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 GNAQP50148 359 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 MRPL12P52815 198 aaKnown RBP11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 CCL23P55773 120 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 RTN1Q16799 776 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 FAM109BQ6ICB4 259 aaPredicted RBP11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 HEATR3Q7Z4Q2 680 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 TMEM87AQ8NBN3 555 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 SMARCC2Q8TAQ2 1214 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 VWCEQ96DN2 955 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 PGBD1Q96JS3 809 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 LZTS2Q9BRK4 669 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 MTG1Q9BT17 334 aaPredicted RBP11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 MAF1Q9H063 256 aa11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 SEC63Q9UGP8 760 aaKnown RBP11.52□□□□□ -0.56
HNRNPC-219ENST00000555309 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 STX6O43752 255 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 ZNF286BP0CG31 522 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 ZSCAN22P10073 491 aaPredicted RBP11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 EVCP57679 992 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 FPGSQ05932 587 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 HSDL1Q3SXM5 330 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 L1TD1Q5T7N2 865 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 SYNE3Q6ZMZ3 975 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 CCDC83Q8IWF9 413 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 SCLYQ96I15 445 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.572e-8■■■□□ 14.8
HNRNPC-219ENST00000555309 WNT8AQ9H1J5 351 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 MAP3K20Q9NYL2 800 aaKnown RBP11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 ATP6V1DQ9Y5K8 247 aa11.52□□□□□ -0.57
HNRNPC-219ENST00000555309 EYSQ5T1H1 3165 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 SCN10AQ9Y5Y9 1956 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 GGPS1O95749 300 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 PDCP20941 246 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 SYT1P21579 422 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 UBA1P22314 1058 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 CCND2P30279 289 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 HIC1Q14526 733 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 MFSD5Q6N075 450 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 DHX37Q8IY37 1157 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 GTF3C6Q969F1 213 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 FAM161BQ96MY7 647 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 CTAGE1Q96RT6 745 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 LLPHQ9BRT6 129 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 NOC4LQ9BVI4 516 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 NCOA5Q9HCD5 579 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 TMEM260Q9NX78 707 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 FRMPD4Q14CM0 1322 aa11.51□□□□□ -0.57
HNRNPC-219ENST00000555309 GRXCR1A8MXD5 290 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 ATP9AO75110 1047 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 MBD3O95983 291 aa11.5□□□□□ -0.57
HNRNPC-219ENST00000555309 GJB2P29033 226 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms