RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 USP17L15C9J2P7 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L13C9JLJ4 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L11C9JVI0 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L18D6R9N7 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L22D6RA61 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L17D6RBQ6 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L19D6RCP7 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L20D6RJB6 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 M0R2N6 131 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 ENC1O14682 589 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L24Q0WX57 530 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 USP17L6PQ6QN14 398 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 SCYL3Q8IZE3 742 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 MTMR8Q96EF0 704 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 ZMYND12Q9H0C1 365 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 HDAC6Q9UBN7 1215 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 FBXO2Q9UK22 296 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-211ENST00000555082 RAB21Q9UL25 225 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 PCDHA1Q9Y5I3 950 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 A0A1B0GTH6 734 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 FAM237AA0A1B0GTK4 181 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 TRAF5O00463 557 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 IVLP07476 585 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 TTC31Q49AM3 519 aaPredicted RBP11.06□□□□□ -0.64
PRKCH-211ENST00000555082 RILPL1Q5EBL4 403 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 GSPT2Q8IYD1 628 aaKnown RBP11.06□□□□□ -0.64
PRKCH-211ENST00000555082 MSANTD4Q8NCY6 345 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 CCDC148Q8NFR7 591 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 CLMNQ96JQ2 1002 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 PANX2Q96RD6 677 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 CSRNP2Q9H175 543 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 ZNF408Q9H9D4 720 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 ZNF112Q9UJU3 913 aa11.06□□□□□ -0.64
PRKCH-211ENST00000555082 CCDC194A0A1B0GVG4 234 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 CALML3P27482 149 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 STAT2P52630 851 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 HMGCS2P54868 508 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 IRX3P78415 501 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 TTC38Q5R3I4 469 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 EPSTI1Q96J88 318 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 NAPGQ99747 312 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 VPS16Q9H269 839 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 EFCC1Q9HA90 598 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 SH3GLB2Q9NR46 395 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 PICK1Q9NRD5 415 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 GUCA1BQ9UMX6 200 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 A0A087X0B3 334 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 SOCS7O14512 581 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 SRGAP2O75044 1071 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 SARSP49591 514 aaKnown RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 ERVK-24P63145 666 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 VGLL4Q14135 290 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 TTLL12Q14166 644 aaPredicted RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 SUPT20HL1Q3ZLR7 823 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 APTXQ7Z2E3 356 aaKnown RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 GOLGA6L1Q8N7Z2 621 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 IQUBQ8NA54 791 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 HNRNPLLQ8WVV9 542 aaKnown RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 TBC1D5Q92609 795 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 CDCA5Q96FF9 252 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 WNK4Q96J92 1243 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 CAPZA3Q96KX2 299 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 C6orf50Q9HD87 102 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 DACH1Q9UI36 760 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 MFAP3LO75121 409 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 RNF40O75150 1001 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 GYPCP04921 128 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRKCH-211ENST00000555082 TANGO6Q9C0B7 1094 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 RRAGCQ9HB90 399 aa11.05□□□□□ -0.64
PRKCH-211ENST00000555082 PEX10O60683 326 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 VCAM1P19320 739 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 PTPREP23469 700 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 HOXA13P31271 388 aaPredicted RBP11.04□□□□□ -0.64
PRKCH-211ENST00000555082 ADCY7P51828 1080 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 USP50Q70EL3 339 aaPredicted RBP11.04□□□□□ -0.64
PRKCH-211ENST00000555082 SYNRGQ9UMZ2 1314 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 DPYDQ12882 1025 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 PTGDRQ13258 359 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 LETM2Q2VYF4 491 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 FBXO11Q86XK2 927 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 CPXCR1Q8N123 301 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 REXO1Q8N1G1 1221 aaKnown RBP11.04□□□□□ -0.64
PRKCH-211ENST00000555082 TBCKQ8TEA7 893 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 TMEM60Q9H2L4 133 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 ELP3Q9H9T3 547 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 TAB2Q9NYJ8 693 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 ADD3Q9UEY8 706 aaKnown RBP11.04□□□□□ -0.64
PRKCH-211ENST00000555082 CTNND2Q9UQB3 1225 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 MAPK8IP1Q9UQF2 711 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 SNCAIPQ9Y6H5 919 aa11.04□□□□□ -0.64
PRKCH-211ENST00000555082 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms