RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FLRT1Q9NZU1 646 aa19.63■□□□□ 0.73
SHOX-204ENST00000554971 PFASO15067 1338 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 LRRC37A2A6NM11 1700 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 hCG_1984214I3L0E3 225 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 CFBP00751 764 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 IGHA2P01877 340 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 NAPAP54920 295 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 USP17L6PQ6QN14 398 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 AOPEPQ8N6M6 819 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 ZNF713Q8N859 430 aaPredicted RBP19.62■□□□□ 0.73
SHOX-204ENST00000554971 PTPN22Q9Y2R2 807 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 PTCH2Q9Y6C5 1203 aa19.62■□□□□ 0.73
SHOX-204ENST00000554971 TRAF1Q13077 416 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 NPY5RQ15761 445 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 ZNF579Q8NAF0 562 aaKnown RBP19.61■□□□□ 0.73
SHOX-204ENST00000554971 SYTL5Q8TDW5 730 aaPredicted RBP19.61■□□□□ 0.73
SHOX-204ENST00000554971 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 CEP131Q9UPN4 1083 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 SOWAHBA6NEL2 793 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 XBP1P17861 261 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 CALML3P27482 149 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 HOXD10P28358 340 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 RGS2P41220 211 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 IRF5Q13568 498 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 PPP1R18Q6NYC8 613 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 DPP9Q86TI2 863 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 C17orf53Q8N3J3 647 aaPredicted RBP19.61■□□□□ 0.73
SHOX-204ENST00000554971 KRI1Q8N9T8 703 aaKnown RBP19.61■□□□□ 0.73
SHOX-204ENST00000554971 CACTINQ8WUQ7 758 aaKnown RBP19.61■□□□□ 0.73
SHOX-204ENST00000554971 APBA2Q99767 749 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 ZMYND12Q9H0C1 365 aa19.61■□□□□ 0.73
SHOX-204ENST00000554971 MYH7BA7E2Y1 1941 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 XRCC5P13010 732 aaKnown RBP19.6■□□□□ 0.73
SHOX-204ENST00000554971 ARHGEF6Q15052 776 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 SHC4Q6S5L8 630 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 MCF2L2Q86YR7 1114 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 TRIB2Q92519 343 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 MAML3Q96JK9 1138 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 PSTPIP2Q9H939 334 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 PAXBP1Q9Y5B6 917 aa19.6■□□□□ 0.73
SHOX-204ENST00000554971 SMCO2A6NFE2 343 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 POTEB2H3BUK9 544 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 PIK3CDO00329 1044 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 ELNP15502 786 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 MARCKSP29966 332 aaPredicted RBP19.59■□□□□ 0.73
SHOX-204ENST00000554971 UBE2SQ16763 222 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 RIC8AQ9NPQ8 531 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 ESYT2A0FGR8 921 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 DPCR1Q3MIW9 517 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 SH3GLB2Q9NR46 395 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 KCNJ14Q9UNX9 436 aa19.59■□□□□ 0.73
SHOX-204ENST00000554971 GCOM1H8Y6P7 765 aaPredicted RBP19.58■□□□□ 0.72
SHOX-204ENST00000554971 POLR2MP0CAP2 368 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 PRMT2P55345 433 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 CCDC144BQ3MJ40 725 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 GLIPR1L2Q4G1C9 344 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 DIS3L2Q8IYB7 885 aaKnown RBP19.58■□□□□ 0.72
SHOX-204ENST00000554971 RAET1EQ8TD07 263 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 TAAR1Q96RJ0 339 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 MAF1Q9H063 256 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 FAM13BQ9NYF5 915 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 KCNH3Q9ULD8 1083 aa19.58■□□□□ 0.72
SHOX-204ENST00000554971 KCNJ6P48051 423 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 CLK2P49760 499 aaKnown RBP19.57■□□□□ 0.72
SHOX-204ENST00000554971 LRMPQ12912 555 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 TRIM32Q13049 653 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 KANK3Q6NY19 840 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 CUL5Q93034 780 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 MAP3K20Q9NYL2 800 aaKnown RBP19.57■□□□□ 0.72
SHOX-204ENST00000554971 DIS3Q9Y2L1 958 aaKnown RBP19.57■□□□□ 0.72
SHOX-204ENST00000554971 KIAA1217Q5T5P2 1943 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 NRDCO43847 1150 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 ADCY3O60266 1144 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 BMP15O95972 392 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 CCDC150Q8NCX0 1101 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 PHF20Q9BVI0 1012 aa19.57■□□□□ 0.72
SHOX-204ENST00000554971 ADCY7P51828 1080 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 COL13A1Q5TAT6 717 aaPredicted RBP19.56■□□□□ 0.72
SHOX-204ENST00000554971 KRBA2Q6ZNG9 492 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 FCHSD1Q86WN1 690 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 CCDC148Q8NFR7 591 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 RASGRP4Q8TDF6 673 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 PXYLP1Q8TE99 480 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 CCDC12Q8WUD4 166 aaPredicted RBP19.56■□□□□ 0.72
SHOX-204ENST00000554971 CCDC34Q96HJ3 373 aa19.56■□□□□ 0.72
SHOX-204ENST00000554971 BTBD18B2RXH4 712 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 M0R2N6 131 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 KIF2AO00139 706 aaPredicted RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 CBFA2T2O43439 604 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 TUBB4AP04350 444 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 CYP2C19P33261 490 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 ALDH5A1P51649 535 aaPredicted RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 NCAPHQ15003 741 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 SYCP1Q15431 976 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 OLFML2BQ68BL8 750 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 FBXO46Q6PJ61 603 aaPredicted RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 MAMDC4Q6UXC1 1216 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 ZNF467Q7Z7K2 595 aaPredicted RBP19.55■□□□□ 0.72
SHOX-204ENST00000554971 SAMD3Q8N6K7 520 aa19.55■□□□□ 0.72
SHOX-204ENST00000554971 SH3TC2Q8TF17 1288 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms