RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 PLCD3Q8N3E9 789 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 MICALL1Q8N3F8 863 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 RAD54LQ92698 747 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 NFU1Q9UMS0 254 aa18.33■□□□□ 0.53
XRCC3-209ENST00000554913 SSU72P8A0A1W2PR75 194 aa18.33■□□□□ 0.52
XRCC3-209ENST00000554913 BAG3O95817 575 aa18.33■□□□□ 0.52
XRCC3-209ENST00000554913 CFAP221Q4G0U5 840 aa18.33■□□□□ 0.52
XRCC3-209ENST00000554913 NBPF5PQ86XG9 351 aaPredicted RBP18.33■□□□□ 0.52
XRCC3-209ENST00000554913 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
XRCC3-209ENST00000554913 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
XRCC3-209ENST00000554913 NOL4O94818 638 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 FTCDO95954 541 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 TNFRSF8P28908 595 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 LIG3P49916 1009 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 FXR2P51116 673 aaKnown RBP eCLIP18.32■□□□□ 0.52
XRCC3-209ENST00000554913 PDCLQ13371 301 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 SNX29Q8TEQ0 813 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 IFT81Q8WYA0 676 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 COA7Q96BR5 231 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 EPB41L5Q9HCM4 733 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 MAST2Q6P0Q8 1798 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 USP17L5A8MUK1 530 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 PALMO75781 387 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 CPP00450 1065 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 EHHADHQ08426 723 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 BARGINQ6ZT62 677 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 RNF10Q8N5U6 811 aaKnown RBP18.32■□□□□ 0.52
XRCC3-209ENST00000554913 WDR66Q8TBY9 1149 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
XRCC3-209ENST00000554913 GPR101Q96P66 508 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-209ENST00000554913 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 SNED1Q8TER0 1413 aa18.32■□□□□ 0.52
XRCC3-209ENST00000554913 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 ATP1A2P50993 1020 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 PPP4CP60510 307 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 GUCY2DQ02846 1103 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 ECM1Q16610 540 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 FAM83BQ5T0W9 1011 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 ICE2Q659A1 982 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 IFT20Q8IY31 132 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 GDF3Q9NR23 364 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 PACSIN2Q9UNF0 486 aaPredicted RBP18.31■□□□□ 0.52
XRCC3-209ENST00000554913 RBAK-RBAKDNI3L0D1 243 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 HEXIM1O94992 359 aaKnown RBP18.31■□□□□ 0.52
XRCC3-209ENST00000554913 TM4SF1P30408 202 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 RNASE9P60153 205 aaKnown RBP18.31■□□□□ 0.52
XRCC3-209ENST00000554913 SKOR1P84550 965 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 NNTQ13423 1086 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 TMEM266Q2M3C6 531 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 SLC9C1Q4G0N8 1177 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 GLE1Q53GS7 698 aaKnown RBP18.31■□□□□ 0.52
XRCC3-209ENST00000554913 NEDD1Q8NHV4 660 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 GJA10Q969M2 543 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 TSG101Q99816 390 aa18.31■□□□□ 0.52
XRCC3-209ENST00000554913 FRMPD2Q68DX3 1309 aaPredicted RBP18.31■□□□□ 0.52
XRCC3-209ENST00000554913 TRAF5O00463 557 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 KLRC1P26715 233 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 POLR2FP61218 127 aaKnown RBP18.3■□□□□ 0.52
XRCC3-209ENST00000554913 TRADDQ15628 312 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 SFMBT2Q5VUG0 894 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 IQCKQ8N0W5 287 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 IPO4Q8TEX9 1081 aaKnown RBP18.3■□□□□ 0.52
XRCC3-209ENST00000554913 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 FGFBP2Q9BYJ0 223 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 EDEM3Q9BZQ6 932 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 FAM107BQ9H098 131 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 ANKIB1Q9P2G1 1089 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 ZNF233A6NK53 670 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 ARID5AQ03989 594 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 ENOX2Q16206 610 aaKnown RBP18.3■□□□□ 0.52
XRCC3-209ENST00000554913 CCDC40Q4G0X9 1142 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 MYOCDQ8IZQ8 938 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 TBC1D5Q92609 795 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 LSM14BQ9BX40 385 aaKnown RBP18.3■□□□□ 0.52
XRCC3-209ENST00000554913 RIC8AQ9NPQ8 531 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 TBC1D7Q9P0N9 293 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 CEP72Q9P209 647 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 COL4A3BPQ9Y5P4 624 aa18.3■□□□□ 0.52
XRCC3-209ENST00000554913 GSTO1P78417 241 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 COASYQ13057 564 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 ORC2Q13416 577 aaPredicted RBP18.29■□□□□ 0.52
XRCC3-209ENST00000554913 ZCWPW2Q504Y3 356 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 CFAP58Q5T655 872 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 KRT79Q5XKE5 535 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 C16orf86Q6ZW13 317 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 KAT2BQ92831 832 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 KRT12Q99456 494 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 RTFDC1Q9BY42 306 aaPredicted RBP18.29■□□□□ 0.52
XRCC3-209ENST00000554913 NYXQ9GZU5 481 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 TSKSQ9UJT2 592 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 SERPING1P05155 500 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 BTDP43251 543 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 FKBP3Q00688 224 aaKnown RBP18.29■□□□□ 0.52
XRCC3-209ENST00000554913 NAB2Q15742 525 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
XRCC3-209ENST00000554913 PACSIN1Q9BY11 444 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms