RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SNCAIPQ9Y6H5 919 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
ATXN3-228ENST00000554592 PDE4DIPQ5VU43 2346 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 UBR2Q8IWV8 1755 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 CLSPNQ9HAW4 1339 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 FKTNO75072 461 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
ATXN3-228ENST00000554592 GARTP22102 1010 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 FAM160A1Q05DH4 1040 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 SLBPQ14493 270 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-228ENST00000554592 FBXL19Q6PCT2 694 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 TOP6BLQ8N6T0 577 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.39
ATXN3-228ENST00000554592 ELMO3Q96BJ8 720 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 EYA3Q99504 573 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 WNT10AQ9GZT5 417 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 FBRSQ9HAH7 460 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 KCNQ5Q9NR82 932 aa6.34□□□□□ -1.39
ATXN3-228ENST00000554592 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ECE2O60344 883 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 CAP2P40123 477 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 GJA8P48165 433 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 OXCT1P55809 520 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 LMNB2Q03252 620 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 CAMK2GQ13555 558 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ANGEL2Q5VTE6 544 aaKnown RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 HDXQ7Z353 690 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 VSIG10LQ86VR7 867 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 PLD6Q8N2A8 252 aaKnown RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 FAM181AQ8N9Y4 354 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 SSU72Q9NP77 194 aaKnown RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
ATXN3-228ENST00000554592 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ARFGEF2Q9Y6D5 1785 aa6.33□□□□□ -1.4
ATXN3-228ENST00000554592 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 GREM1O60565 184 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 EOMESO95936 686 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 INHBEP58166 350 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 GPSM2P81274 684 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 SREBF2Q12772 1141 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 NKG7Q16617 165 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 WIPI1Q5MNZ9 446 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 ABI1Q8IZP0 508 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 GOLM1Q8NBJ4 401 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 KCT2Q8NC54 265 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 BCL7CQ8WUZ0 217 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 GPRASP2Q96D09 838 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 PAK6Q9NQU5 681 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-228ENST00000554592 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
ATXN3-228ENST00000554592 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-228ENST00000554592 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 LRIG2O94898 1065 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
ATXN3-228ENST00000554592 RPS8P62241 208 aaKnown RBP6.31□□□□□ -1.4
ATXN3-228ENST00000554592 MCTP1Q6DN14 999 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 CBLL1Q75N03 491 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 COPS6Q7L5N1 327 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 SPRED2Q7Z698 418 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 NETO1Q8TDF5 533 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 CELF1Q92879 486 aaKnown RBP6.31□□□□□ -1.4
ATXN3-228ENST00000554592 GMLQ99445 158 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
ATXN3-228ENST00000554592 TACC3Q9Y6A5 838 aa6.31□□□□□ -1.4
ATXN3-228ENST00000554592 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 FAM221AA4D161 298 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 RBAK-RBAKDNI3L0D1 243 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 IGF2BP3O00425 579 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-228ENST00000554592 SLITRK5O94991 958 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 DNAJA1P31689 397 aaKnown RBP6.3□□□□□ -1.4
ATXN3-228ENST00000554592 GRK4P32298 578 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 NF2P35240 595 aa6.3□□□□□ -1.4
ATXN3-228ENST00000554592 AIMP1Q12904 312 aaKnown RBP6.3□□□□□ -1.4
ATXN3-228ENST00000554592 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms