RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 FIBPO43427 364 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 GGPS1O95749 300 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 FGBP02675 491 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 PFKMP08237 780 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 UBA1P22314 1058 aaKnown RBP10.03□□□□□ -0.8
ACTN1-213ENST00000554508 PSEN2P49810 448 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 CCL23P55773 120 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 SP2Q02086 613 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 NEDD9Q14511 834 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 ZNF697Q5TEC3 545 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 RASIP1Q5U651 963 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 BLOC1S2Q6QNY1 142 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 ZNF365Q70YC5 407 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 Q7L0L9 218 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 NLRX1Q86UT6 975 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 CCDC155Q8N6L0 562 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 RETREG2Q8NC44 543 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 HERVK_113Q902F9 699 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 KAT2BQ92831 832 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 TCEANC2Q96MN5 208 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 SPATA33Q96N06 139 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 SENP7Q9BQF6 1050 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 MTIF3Q9H2K0 278 aaKnown RBP10.03□□□□□ -0.8
ACTN1-213ENST00000554508 NOD1Q9Y239 953 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 TET1Q8NFU7 2136 aa10.03□□□□□ -0.8
ACTN1-213ENST00000554508 GBF1Q92538 1859 aa10.02□□□□□ -0.8
ACTN1-213ENST00000554508 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.8
ACTN1-213ENST00000554508 hCG_1642624A0A1W2PR95 340 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 SPDYE3A6NKU9 549 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 GOLGA8AA7E2F4 631 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 GOLGA8BA8MQT2 603 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 HAS3O00219 553 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 F2P00734 622 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 ACRP10323 421 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 CYP2C9P11712 490 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 RFC2P35250 354 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 FUT2Q10981 343 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 BFSP2Q13515 415 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 PTGISQ16647 500 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 HSDL1Q3SXM5 330 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 Q6ZUG5 572 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 HEATR3Q7Z4Q2 680 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 C7orf31Q8N865 590 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 GIMAP8Q8ND71 665 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-213ENST00000554508 CAGE1Q8TC20 777 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 ZFP91Q96JP5 570 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-213ENST00000554508 CDHR1Q96JP9 859 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 JAKMIP1Q96N16 626 aaKnown RBP10.02□□□□□ -0.81
ACTN1-213ENST00000554508 GLT8D2Q9H1C3 349 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 WNT8AQ9H1J5 351 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 EHMT1Q9H9B1 1298 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 RTEL1Q9NZ71 1219 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 GTF2IRD1Q9UHL9 959 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 V9GY48 417 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-213ENST00000554508 UMODL1Q5DID0 1318 aa10.02□□□□□ -0.81
ACTN1-213ENST00000554508 MAFGO15525 162 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 PARNO95453 639 aaKnown RBP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 FOSP01100 380 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 RPS6KB1P23443 525 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 CDC27P30260 824 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 NAPAP54920 295 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 MFSD10Q14728 455 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 WWC2Q6AWC2 1192 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 GDF6Q6KF10 455 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 CYFIP1Q7L576 1253 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 GPKOWQ92917 476 aaPredicted RBP eCLIP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 GPRASP2Q96D09 838 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 SCLYQ96I15 445 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 ALG1Q9BT22 464 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 USP26Q9BXU7 913 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 AGXT2Q9BYV1 514 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 SEMA6BQ9H3T3 888 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 RIC8AQ9NPQ8 531 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 FAM217BQ9NTX9 383 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 HDAC6Q9UBN7 1215 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 NAP1L2Q9ULW6 460 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 PCDHA6Q9UN73 950 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 PCDHA8Q9Y5H6 950 aa10.01□□□□□ -0.81
ACTN1-213ENST00000554508 LAMA2P24043 3122 aaKnown RBP10.01□□□□□ -0.81
ACTN1-213ENST00000554508 H3BRB1 525 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 NOP56O00567 594 aaKnown RBP10□□□□□ -0.81
ACTN1-213ENST00000554508 IQCF3P0C7M6 154 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 ZNF286BP0CG31 522 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 ACTN1P12814 892 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 CPA1P15085 419 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
ACTN1-213ENST00000554508 RBL2Q08999 1139 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 APOBRQ0VD83 1088 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 SEMA3FQ13275 785 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 OTOP2Q7RTS6 562 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 AFAP1L1Q8TED9 768 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 PPP1R13LQ8WUF5 828 aa10□□□□□ -0.81
ACTN1-213ENST00000554508 BRF1Q92994 677 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms