RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 BSDC1Q9NW68 430 aaPredicted RBP7.72□□□□□ -1.17
SCFD1-212ENST00000554486 CD2APQ9Y5K6 639 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 LRRC37AA6NMS7 1700 aa7.72□□□□□ -1.17
SCFD1-212ENST00000554486 HYAL3O43820 417 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-212ENST00000554486 BBOX1O75936 387 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 LMNB1P20700 586 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 GRIK1P39086 918 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 IL15P40933 162 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-212ENST00000554486 TGFB2P61812 414 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 TFCP2Q12800 502 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 OS9Q13438 667 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-212ENST00000554486 MPP2Q14168 576 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 PPM1JQ5JR12 505 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 CDPF1Q6NVV7 123 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 REC114Q7Z4M0 266 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 UBE3DQ7Z6J8 389 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 ERC1Q8IUD2 1116 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 SLITRK4Q8IW52 837 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 VGLL2Q8N8G2 317 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 NLGN2Q8NFZ4 835 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 RASGRP4Q8TDF6 673 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 KIF1BPQ96EK5 621 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 LRRCC1Q9C099 1032 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 CCSER2Q9H7U1 834 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 MINPP1Q9UNW1 487 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 AP4E1Q9UPM8 1137 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 SNCAIPQ9Y6H5 919 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 SRCAPQ6ZRS2 3230 aa7.71□□□□□ -1.18
SCFD1-212ENST00000554486 LTBP1Q14766 1721 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 FAM95CA0A1B0GW59 222 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 SNAP23O00161 211 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 COBLO75128 1261 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 ALDH1B1P30837 517 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 CHRNDQ07001 517 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 TTLL4Q14679 1199 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 NFKBIBQ15653 356 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 SGO2Q562F6 1265 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 METTL24Q5JXM2 366 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 PAOXQ6QHF9 649 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 DYMQ7RTS9 669 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 CHD1LQ86WJ1 897 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 SKAP1Q86WV1 359 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 C16orf71Q8IYS4 520 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-212ENST00000554486 LNPKQ9C0E8 428 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 IL1RAPL2Q9NP60 686 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 PPP1R1BQ9UD71 204 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-212ENST00000554486 CORINQ9Y5Q5 1042 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 MROH5Q6ZUA9 1318 aa7.7□□□□□ -1.18
SCFD1-212ENST00000554486 ZNF609O15014 1411 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 WTIPA6NIX2 430 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-212ENST00000554486 TAF5LO75529 589 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 PDE8BO95263 885 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 FGFR2P21802 821 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 GPSM2P81274 684 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 TNNI3KQ59H18 835 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 ZBTB37Q5TC79 503 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 OLFM4Q6UX06 510 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 SP8Q8IXZ3 490 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 TTLL6Q8N841 843 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 RNF214Q8ND24 703 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 OTUD7AQ8TE49 926 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-212ENST00000554486 EAF2Q96CJ1 260 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-212ENST00000554486 GPRASP2Q96D09 838 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 BRMS1Q9HCU9 246 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 GPR108Q9NPR9 543 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 PCMTD2Q9NV79 361 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 INPP5FQ9Y2H2 1132 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 ATP6V0A2Q9Y487 856 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 FPGT-TNNI3KV9GXZ4 949 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 SALL3Q9BXA9 1300 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 ARAP2Q8WZ64 1704 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 SNED1Q8TER0 1413 aa7.69□□□□□ -1.18
SCFD1-212ENST00000554486 DUOX1Q9NRD9 1551 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 ADORA1P30542 326 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 ASPAP45381 313 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 TIMM10P62072 90 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 APOBRQ0VD83 1088 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 ATP2B3Q16720 1220 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 SEZ6Q53EL9 994 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 HDXQ7Z353 690 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 AACSQ86V21 672 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 CLASRPQ8N2M8 674 aaKnown RBP7.68□□□□□ -1.18
SCFD1-212ENST00000554486 FBLIM1Q8WUP2 373 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 ELMO3Q96BJ8 720 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 ANKRD2Q9GZV1 360 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 CCDC8Q9H0W5 538 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-212ENST00000554486 CAPN10Q9HC96 672 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 GINM1Q9NU53 330 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 PIM2Q9P1W9 311 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 IRS2Q9Y4H2 1338 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 ARFGEF1Q9Y6D6 1849 aa7.68□□□□□ -1.18
SCFD1-212ENST00000554486 FER1L6Q2WGJ9 1857 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 A0A1B0GUL7 405 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 GRIN3BO60391 1043 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 SSTR4P31391 388 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 CLCQ05315 142 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 UBE4AQ14139 1066 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 MAP7Q14244 749 aa7.67□□□□□ -1.18
SCFD1-212ENST00000554486 PUM3Q15397 648 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms