RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 PM20D1Q6GTS8 502 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 SIGIRRQ6IA17 410 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 HOOK3Q86VS8 718 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 KIAA0319LQ8IZA0 1049 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 FLCNQ8NFG4 579 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 RPGRQ92834 1020 aaKnown RBP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 HIC2Q96JB3 615 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 AIFM3Q96NN9 605 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 ATAD3AQ9NVI7 634 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 PCOLCE2Q9UKZ9 415 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 RTCBQ9Y3I0 505 aaKnown RBP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 LAMC3Q9Y6N6 1575 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 USP31Q70CQ4 1352 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 TMCC2O75069 709 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 P4HA1P13674 534 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 IBSPP21815 317 aaPredicted RBP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 TRHRP34981 398 aaPredicted RBP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 FXR1P51114 621 aaKnown RBP eCLIP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 INAQ16352 499 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 LEXMQ3ZCV2 418 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 EFHC1Q5JVL4 640 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 RNASEH2BQ5TBB1 312 aaKnown RBP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 NBPF14Q5TI25 921 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 FBXO38Q6PIJ6 1188 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 CORO6Q6QEF8 472 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 SLC30A10Q6XR72 485 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 CCDC149Q6ZUS6 474 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 GLRX5Q86SX6 157 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 ZNF565Q8N9K5 539 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 SPC24Q8NBT2 197 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 ADAMTS18Q8TE60 1221 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 TMA16Q96EY4 203 aaKnown RBP4.31□□□□□ -1.72
LRFN5-204ENST00000554171 EBF2Q9HAK2 575 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 SLC4A4Q9Y6R1 1079 aa4.31□□□□□ -1.72
LRFN5-204ENST00000554171 CCDC171Q6TFL3 1326 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CAMTA1Q9Y6Y1 1673 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CCDC162PA2VCL2 907 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ALDH1A2O94788 518 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ITGB1P05556 798 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 AXLP30530 894 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ASMTP46597 345 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CPA2P48052 419 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 POLR2FP61218 127 aaKnown RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CDC20Q12834 499 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SETMARQ53H47 684 aaPredicted RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 AKAP4Q5JQC9 854 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SLC6A19Q695T7 634 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SLC51BQ86UW2 128 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 TMIGD2Q96BF3 282 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 WRNIP1Q96S55 665 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CIB1Q99828 191 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 HGH1Q9BTY7 390 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SRCIN1Q9C0H9 1055 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 BHMT2Q9H2M3 363 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SERHL2Q9H4I8 314 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 EHD1Q9H4M9 534 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CRLF2Q9HC73 371 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 PREBQ9HCU5 417 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SLC7A8Q9UHI5 535 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SALL4Q9UJQ4 1053 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 RNF112Q9ULX5 631 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 PHF20L1A8MW92 1017 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 UBAP1LF5GYI3 381 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 K7ENM7 598 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CCDC166P0CW27 439 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 HPGDP15428 266 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 IRS1P35568 1242 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ACTN2P35609 894 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 BCAMP50895 628 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 PMS2P54278 862 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 HADHBP55084 474 aaKnown RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ITGA7Q13683 1181 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SAFBQ15424 915 aaKnown RBP eCLIP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SH3D19Q5HYK7 790 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 RNF187Q5TA31 235 aaPredicted RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 NXNQ6DKJ4 435 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 TSPYL5Q86VY4 417 aaPredicted RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 TBC1D21Q8IYX1 336 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ZNF280CQ8ND82 737 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SCG3Q8WXD2 468 aaKnown RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 BAP1Q92560 729 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CMTM3Q96MX0 182 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 UIMC1Q96RL1 719 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 DTLQ9NZJ0 730 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 ADD3Q9UEY8 706 aaKnown RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CARD8Q9Y2G2 431 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 MAP3K5Q99683 1374 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CAPN8A6NHC0 703 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 B4DLN1 442 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CAPN9O14815 690 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SCAMP3O14828 347 aaKnown RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 SLC22A3O75751 556 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CFL1P23528 166 aaKnown RBP4.3□□□□□ -1.72
LRFN5-204ENST00000554171 DNAJB2P25686 324 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 CBX5P45973 191 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 POU3F4P49335 361 aa4.3□□□□□ -1.72
LRFN5-204ENST00000554171 MLLT6P55198 1093 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms