RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CRHR2Q13324 411 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 MTMR1Q13613 665 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 KIF22Q14807 665 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 SHC4Q6S5L8 630 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 GPR142Q7Z601 462 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 FAM133AQ8N9E0 248 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 WDR11Q9BZH6 1224 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 KCNMB3Q9NPA1 279 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 LRWD1Q9UFC0 647 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 KCNH3Q9ULD8 1083 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 RLFQ13129 1914 aa11.8□□□□□ -0.52
TMEM55B-205ENST00000554028 DNAJC25-GNG10A0A024R161 153 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 IGLV3-22A0A075B6J6 115 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 MSH4O15457 936 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 EDIL3O43854 480 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 GAS7O60861 476 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 PGK2P07205 417 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 PFKFB1P16118 471 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 ADORA2AP29274 412 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 VEGFBP49765 207 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 NDUFA8P51970 172 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 CCDC183Q5T5S1 534 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 LRCH2Q5VUJ6 765 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 KANK3Q6NY19 840 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 CAVIN1Q6NZI2 390 aaKnown RBP11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 IL31RAQ8NI17 732 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 GPRASP2Q96D09 838 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 CALML4Q96GE6 196 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 CDK5RAP3Q96JB5 506 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 PURBQ96QR8 312 aaKnown RBP11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 ZIC5Q96T25 663 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 RIT2Q99578 217 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 SDF4Q9BRK5 362 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 TEKT3Q9BXF9 490 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 TBC1D22BQ9NU19 505 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 USP25Q9UHP3 1055 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 DIS3Q9Y2L1 958 aaKnown RBP11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 ADGRA2Q96PE1 1338 aa11.79□□□□□ -0.52
TMEM55B-205ENST00000554028 A0A0G2JMZ2 1700 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 FAM237AA0A1B0GTK4 181 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 SOWAHBA6NEL2 793 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 POTEMA6NI47 508 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 TNPO2O14787 897 aaKnown RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 CTAGE5O15320 804 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 SLC26A4O43511 780 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 NR1I2O75469 434 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 ZNF202O95125 648 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 ARP10275 920 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 ITGB5P18084 799 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 LIG1P18858 919 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 MRPS9P82933 396 aaKnown RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 GRIN1Q05586 938 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 IL17AQ16552 155 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 ZNF467Q7Z7K2 595 aaPredicted RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 CABP7Q86V35 215 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 CEP57L1Q8IYX8 460 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 IQUBQ8NA54 791 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 CYP2W1Q8TAV3 490 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 ETNPPLQ8TBG4 499 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 SYMPKQ92797 1274 aaKnown RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 HAS1Q92839 578 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 ZFP91Q96JP5 570 aaPredicted RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 INPP4AQ96PE3 977 aaPredicted RBP11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 NUDT12Q9BQG2 462 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 KCNH7Q9NS40 1196 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 PARP14Q460N5 1801 aa11.78□□□□□ -0.52
TMEM55B-205ENST00000554028 POLR2DO15514 142 aaKnown RBP11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 TGFB3P10600 412 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 FCGRTP55899 365 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 MAP2K5Q13163 448 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 GRB14Q14449 540 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 ARHGEF6Q15052 776 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 ZRSR1Q15695 479 aaKnown RBP11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 ZNF792Q3KQV3 632 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 HAUS3Q68CZ6 603 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 NCAPH2Q6IBW4 605 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 FMR1NBQ8N0W7 255 aaPredicted RBP11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 GIMAP8Q8ND71 665 aaPredicted RBP11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 CNNM3Q8NE01 707 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 SLC5A5Q92911 643 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 LENG9Q96B70 501 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 EPSTI1Q96J88 318 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 TIGD1Q96MW7 591 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 PANK2Q9BZ23 570 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 CCSER1Q9C0I3 900 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 NUP62CLQ9H1M0 184 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 TNMDQ9H2S6 317 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 GOLPH3LQ9H4A5 285 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 AGO4Q9HCK5 861 aaKnown RBP11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 HPSEQ9Y251 543 aa11.77□□□□□ -0.53
TMEM55B-205ENST00000554028 KDM3AQ9Y4C1 1321 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms