RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 GPRC5DQ9NZD1 345 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 ADAMTS6Q9UKP5 1117 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 ZBTB1Q9Y2K1 713 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 SCN4AP35499 1836 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 TIAM2Q8IVF5 1701 aa7.98□□□□□ -1.13
ATXN3-223ENST00000553686 NCAPD2Q15021 1401 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 RECKO95980 971 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 ZNF165P49910 485 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 EIF5P55010 431 aaKnown RBP7.97□□□□□ -1.13
ATXN3-223ENST00000553686 ARSHQ5FYA8 562 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 SLITRK4Q8IW52 837 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 REXO1Q8N1G1 1221 aaKnown RBP7.97□□□□□ -1.13
ATXN3-223ENST00000553686 PIWIL2Q8TC59 973 aaKnown RBP7.97□□□□□ -1.13
ATXN3-223ENST00000553686 Q96M66 194 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 GBA2Q9HCG7 927 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-223ENST00000553686 LMCD1Q9NZU5 365 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 PCDHGB7Q9Y5F8 929 aa7.97□□□□□ -1.13
ATXN3-223ENST00000553686 LRRN2O75325 713 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 CHMP4BP1P59074 171 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 RACK1P63244 317 aaKnown RBP7.96□□□□□ -1.14
ATXN3-223ENST00000553686 THAP5Q7Z6K1 395 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 NIM1KQ8IY84 436 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 CARD11Q9BXL7 1154 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 RC3H2Q9HBD1 1191 aaKnown RBP7.96□□□□□ -1.14
ATXN3-223ENST00000553686 GMIPQ9P107 970 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 KCNH3Q9ULD8 1083 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 CASP8AP2Q9UKL3 1982 aa7.96□□□□□ -1.14
ATXN3-223ENST00000553686 KLRG2A4D1S0 409 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-223ENST00000553686 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 RGS13O14921 159 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 PAX4O43316 350 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 RAG1P15918 1043 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 NBPF5PQ86XG9 351 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-223ENST00000553686 KREMEN1Q96MU8 473 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 DUSP15Q9H1R2 295 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-223ENST00000553686 VPS33BQ9H267 617 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
ATXN3-223ENST00000553686 KIAA1522Q9P206 1035 aaPredicted RBP7.95□□□□□ -1.14
ATXN3-223ENST00000553686 DDX41Q9UJV9 622 aaKnown RBP7.95□□□□□ -1.14
ATXN3-223ENST00000553686 MON2Q7Z3U7 1717 aa7.95□□□□□ -1.14
ATXN3-223ENST00000553686 ADAMTSL1Q8N6G6 1762 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 WASH4PA8MWX3 477 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 H7C1D1 291 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 OLFM4Q6UX06 510 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 LRRN4CLQ8ND94 238 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 RNF141Q8WVD5 230 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 ATG4CQ96DT6 458 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 TEX13AQ9BXU3 409 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-223ENST00000553686 TMX4Q9H1E5 349 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-223ENST00000553686 ANTXR1Q9H6X2 564 aa7.94□□□□□ -1.14
ATXN3-223ENST00000553686 ZNF831Q5JPB2 1677 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 BIN1O00499 593 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 FKTNO75072 461 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 TBC1D8O95759 1140 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 JUNBP17275 347 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-223ENST00000553686 ITGB5P18084 799 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 GMPSP49915 693 aaPredicted RBP7.93□□□□□ -1.14
ATXN3-223ENST00000553686 TNIP1Q15025 636 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 LRRFIP1Q32MZ4 808 aaKnown RBP7.93□□□□□ -1.14
ATXN3-223ENST00000553686 CDCP2Q5VXM1 449 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 KRT26Q7Z3Y9 468 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 METTL16Q86W50 562 aaKnown RBP7.93□□□□□ -1.14
ATXN3-223ENST00000553686 ZNF654Q8IZM8 581 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 DTWD2Q8NBA8 298 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 CNNM2Q9H8M5 875 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 SLC52A2Q9HAB3 445 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 GPATCH2Q9NW75 528 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 CDHR2Q9BYE9 1310 aa7.93□□□□□ -1.14
ATXN3-223ENST00000553686 H0YGN5 161 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 UBOX5O94941 541 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 IL6STP40189 918 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-223ENST00000553686 CXCL9Q07325 125 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 EIF4A2Q14240 407 aaKnown RBP7.92□□□□□ -1.14
ATXN3-223ENST00000553686 OVOS1Q6IE37 1185 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 CLEC4GQ6UXB4 293 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 ATG4DQ86TL0 474 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-223ENST00000553686 DCPSQ96C86 337 aaKnown RBP7.92□□□□□ -1.14
ATXN3-223ENST00000553686 ASIC4Q96FT7 647 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 TRIT1Q9H3H1 467 aaKnown RBP7.92□□□□□ -1.14
ATXN3-223ENST00000553686 ZNRF3Q9ULT6 936 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 ITGB4P16144 1822 aa7.92□□□□□ -1.14
ATXN3-223ENST00000553686 PPIP5K2O43314 1243 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 EN2P19622 333 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-223ENST00000553686 TPP2P29144 1249 aaPredicted RBP7.91□□□□□ -1.14
ATXN3-223ENST00000553686 SLC39A6Q13433 755 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 TMPRSS7Q7RTY8 843 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 CREG2Q8IUH2 290 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 VWCEQ96DN2 955 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 ASPNQ9BXN1 380 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 KRTAP4-8Q9BYQ9 185 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 GPR62Q9BZJ7 368 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-223ENST00000553686 CNOT7Q9UIV1 285 aaKnown RBP7.91□□□□□ -1.14
ATXN3-223ENST00000553686 ZNF652Q9Y2D9 606 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 RNF114Q9Y508 228 aa7.91□□□□□ -1.14
ATXN3-223ENST00000553686 NPC1L1Q9UHC9 1359 aa7.9□□□□□ -1.14
ATXN3-223ENST00000553686 CAMTA2O94983 1202 aa7.9□□□□□ -1.14
ATXN3-223ENST00000553686 ESR1P03372 595 aa7.9□□□□□ -1.14
ATXN3-223ENST00000553686 SRFP11831 508 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms