RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MCM3P25205 808 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 MCM6Q14566 821 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 CCDC96Q2M329 555 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 VWA3BQ502W6 1294 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 STRIP1Q5VSL9 837 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 NUCKS1Q9H1E3 243 aaKnown RBP14.35□□□□□ -0.11
SHMT2-205ENST00000553474 NDST4Q9H3R1 872 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 SEMA6BQ9H3T3 888 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 PRDM10Q9NQV6 1147 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 RNF181Q9P0P0 153 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 REXO2Q9Y3B8 237 aaKnown RBP14.35□□□□□ -0.11
SHMT2-205ENST00000553474 SIPA1L1O43166 1804 aa14.35□□□□□ -0.11
SHMT2-205ENST00000553474 TBX3O15119 743 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 TBC1D8O95759 1140 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 GNA14O95837 355 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 LMNB1P20700 586 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 CRKP46108 304 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 PAPD7Q5XG87 772 aaKnown RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 DDX12PQ92771 950 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 MBOAT7Q96N66 472 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 UBXN6Q9BZV1 441 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 NHEJ1Q9H9Q4 299 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 SLC39A2Q9NP94 309 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 PRDM4Q9UKN5 801 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 COL2A1P02458 1487 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 ATAD5Q96QE3 1844 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 POTEMA6NI47 508 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 F8W031 263 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 MARCH6O60337 910 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 LCA5LO95447 670 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 FKBP3Q00688 224 aaKnown RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 TRAF1Q13077 416 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 GPS2Q13227 327 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 CCDC122Q5T0U0 273 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 KIAA1328Q86T90 577 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 MYOCDQ8IZQ8 938 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 HAS1Q92839 578 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 CEP63Q96MT8 703 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
SHMT2-205ENST00000553474 AGPAT5Q9NUQ2 364 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 PITPNM2Q9BZ72 1349 aa14.34□□□□□ -0.11
SHMT2-205ENST00000553474 MPHOSPH10O00566 681 aaKnown RBP14.33□□□□□ -0.12
SHMT2-205ENST00000553474 USO1O60763 962 aaKnown RBP14.33□□□□□ -0.12
SHMT2-205ENST00000553474 FOSP01100 380 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-205ENST00000553474 PLA2G4AP47712 749 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 EIF6P56537 245 aaKnown RBP14.33□□□□□ -0.12
SHMT2-205ENST00000553474 HERVK_113P62684 666 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.12
SHMT2-205ENST00000553474 SPA17Q15506 151 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 HAUS3Q68CZ6 603 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 TATDN1Q6P1N9 297 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 TMEM179Q6ZVK1 233 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 CCDC65Q8IXS2 484 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 JAKMIP2Q96AA8 810 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 DNAJC19Q96DA6 116 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 CCDC42Q96M95 316 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 PCMTD1Q96MG8 357 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-205ENST00000553474 KCNMB3Q9NPA1 279 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 KCNQ5Q9NR82 932 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 GUCA1BQ9UMX6 200 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 SIK3Q9Y2K2 1263 aa14.33□□□□□ -0.12
SHMT2-205ENST00000553474 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 A0A0U1RQJ8 604 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 RASSF10A6NK89 507 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 SLC1A4P43007 532 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 VAV2P52735 878 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 MARSP56192 900 aaKnown RBP14.32□□□□□ -0.12
SHMT2-205ENST00000553474 KIF5AQ12840 1032 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 CERKLQ49MI3 558 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-205ENST00000553474 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 IQCEQ6IPM2 695 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 WDR93Q6P2C0 686 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 LRRC55Q6ZSA7 311 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 GMCL1P1Q8NEA9 526 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 ATRIPQ8WXE1 791 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 GMCL1Q96IK5 515 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 FUT8Q9BYC5 575 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 ANKZF1Q9H8Y5 726 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 SERPINA10Q9UK55 444 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 SAR1BQ9Y6B6 198 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 USP17L10C9JJH3 530 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 MAP2K7O14733 419 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 RAD17O75943 681 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 IDEP14735 1019 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 SCNN1DP51172 638 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 LONRF2Q1L5Z9 754 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 ZCWPW2Q504Y3 356 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 DYMQ7RTS9 669 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 TRIM58Q8NG06 486 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 SYN2Q92777 582 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-205ENST00000553474 TRIM34Q9BYJ4 488 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 PCDHA1Q9Y5I3 950 aa14.32□□□□□ -0.12
SHMT2-205ENST00000553474 COASYQ13057 564 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 UBE2SQ16763 222 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 QRICH1Q2TAL8 776 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms