RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 CASTP20810 708 aaKnown RBP13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 CALML3P27482 149 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 PSEN2P49810 448 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 HIC1Q14526 733 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 GSE1Q14687 1217 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 PLEKHG4Q58EX7 1191 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 SYDE2Q5VT97 1194 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 TRIM67Q6ZTA4 783 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 FBXO11Q86XK2 927 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 TOP1MTQ969P6 601 aa13.42□□□□□ -0.26
SUPT16H-202ENST00000552829 EMSYQ7Z589 1322 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 C5orf67F2Z3F1 127 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 GFRA3O60609 400 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 HMMRO75330 724 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 LINC00271P0C7V0 271 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 SLC16A2P36021 539 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 PPARAQ07869 468 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 HYAL1Q12794 435 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 SMAD4Q13485 552 aaKnown RBP13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 LY6KQ17RY6 165 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 PANK1Q8TE04 598 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 EMID1Q96A84 441 aaPredicted RBP13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 MPHOSPH6Q99547 160 aaKnown RBP13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 RCAN3Q9UKA8 241 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 STX8Q9UNK0 236 aa13.41□□□□□ -0.26
SUPT16H-202ENST00000552829 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 B4DLN1 442 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 F2P00734 622 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 APPP05067 770 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 ZFYP08048 801 aaPredicted RBP13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 DGKDQ16760 1214 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 EP400NLQ6ZTU2 488 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 FBXL6Q8N531 539 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 C7orf31Q8N865 590 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 PNMA2Q9UL42 364 aa13.4□□□□□ -0.26
SUPT16H-202ENST00000552829 WDR19Q8NEZ3 1342 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 LOC730098B7Z3J9 87 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 STXBP3O00186 592 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 TBX10O75333 385 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 EYA4O95677 639 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 RB1P06400 928 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 ZXDAP98168 799 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 ADAM15Q13444 863 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 MFSD10Q14728 455 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 CLUL1Q15846 466 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 KIAA0753Q2KHM9 967 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 SERINC5Q86VE9 423 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 MAF1Q9H063 256 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 LMAN2LQ9H0V9 348 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 INCENPQ9NQS7 918 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 ECHDC1Q9NTX5 307 aa13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 DDX41Q9UJV9 622 aaKnown RBP13.39□□□□□ -0.27
SUPT16H-202ENST00000552829 WDR87Q6ZQQ6 2873 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 GVINP1Q7Z2Y8 2422 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 VPS13AQ96RL7 3174 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 RSPH10B2B2RC85 870 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 GRM6O15303 877 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 FOXP2O15409 715 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 RSPH10BP0C881 870 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 HOXC8P31273 242 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 MSLNLQ96KJ4 702 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 CD207Q9UJ71 328 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 TTC3P53804 2025 aa13.38□□□□□ -0.27
SUPT16H-202ENST00000552829 TSPY2A6NKD2 308 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 PROB1E7EW31 1015 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 FGRP09769 529 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 GTF2F1P35269 517 aaKnown RBP eCLIP13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 BMPR1AP36894 532 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 CAMK1Q14012 370 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 SEPT14Q6ZU15 432 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 CHST3Q7LGC8 479 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 PPTC7Q8NI37 304 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 SEC62Q99442 399 aaKnown RBP13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 NAPBQ9H115 298 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
SUPT16H-202ENST00000552829 MYO15AQ9UKN7 3530 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 LINC01565O15544 149 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 ORC4O43929 436 aa13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 SMARCA5O60264 1052 aaPredicted RBP13.36□□□□□ -0.27
SUPT16H-202ENST00000552829 ZNF286BP0CG31 522 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms