RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 GDAQ9Y2T3 454 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 CEP350Q5VT06 3117 aa9.13□□□□□ -0.95
CHPT1-208ENST00000552215 TBC1D12O60347 775 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 EVCP57679 992 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 ERVK-9P63128 1117 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 ERVK-24P63145 666 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 HAUS3Q68CZ6 603 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 CDR2LQ86X02 465 aaPredicted RBP9.12□□□□□ -0.95
CHPT1-208ENST00000552215 ZBTB10Q96DT7 871 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 APOL6Q9BWW8 343 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 VPS16Q9H269 839 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 PDGFCQ9NRA1 345 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 SEPT11Q9NVA2 429 aaKnown RBP9.12□□□□□ -0.95
CHPT1-208ENST00000552215 SPDYE5A6NIY4 337 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 TPM2P07951 284 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 STX1AQ16623 288 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 SPRYD7Q5W111 196 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 PPP4R3AQ6IN85 833 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 GALNT17Q6IS24 598 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 CLSTN2Q9H4D0 955 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 SLC38A10Q9HBR0 1119 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 DISC1Q9NRI5 854 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 COL20A1Q9P218 1284 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 CLIC2O15247 247 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 PTPREP23469 700 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 DCAF17Q5H9S7 520 aaPredicted RBP9.12□□□□□ -0.95
CHPT1-208ENST00000552215 DPH6Q7L8W6 267 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 NLRP4Q96MN2 994 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 PCIF1Q9H4Z3 704 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 AGTPBP1Q9UPW5 1226 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 RABGAP1Q9Y3P9 1069 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 SRPRBQ9Y5M8 271 aaKnown RBP9.12□□□□□ -0.95
CHPT1-208ENST00000552215 CXCL11O14625 94 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 MEIS2O14770 477 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 MSH4O15457 936 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 MSNP26038 577 aaKnown RBP9.12□□□□□ -0.95
CHPT1-208ENST00000552215 GJA5P36382 358 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 CYP2J2P51589 502 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 LRSAM1Q6UWE0 723 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
CHPT1-208ENST00000552215 AKAP11Q9UKA4 1901 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 ATP9AO75110 1047 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 LETM1O95202 739 aaPredicted RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 POLGP54098 1239 aaPredicted RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 TBC1D8BQ0IIM8 1120 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 PPIL2Q13356 520 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 TTC16Q8NEE8 873 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 IGKV6D-41A0A0C4DH26 115 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 C11orf57Q6ZUT1 292 aaPredicted RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 SH3GLB2Q9NR46 395 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 FBXO2Q9UK22 296 aaPredicted RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 TOMM70O94826 608 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 MRE11P49959 708 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 ATN1P54259 1190 aaPredicted RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 PSMC6P62333 389 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 ODR4Q5SWX8 454 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 TRAPPC12Q8WVT3 735 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 LARP4BQ92615 738 aaKnown RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 LXNQ9BS40 222 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 CRACR2AQ9BSW2 395 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 KIFC3Q9BVG8 833 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
CHPT1-208ENST00000552215 KIAA1468Q9P260 1216 aa9.11□□□□□ -0.95
CHPT1-208ENST00000552215 N4BP3O15049 544 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 OFD1O75665 1012 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 ADCY5O95622 1261 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 PLA2G4BP0C869 781 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 ADCYAP1R1P41586 468 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 BEX3Q00994 111 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 SLFN12Q8IYM2 578 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 LRRC71Q8N4P6 559 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 ANKS1AQ92625 1134 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 PDCD2LQ9BRP1 358 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 SLC5A4Q9NY91 659 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 ANKFY1Q9P2R3 1169 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 AKT3Q9Y243 479 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 TRIM17Q9Y577 477 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 PRPF6O94906 941 aaKnown RBP9.1□□□□□ -0.95
CHPT1-208ENST00000552215 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
CHPT1-208ENST00000552215 TSR1Q2NL82 804 aaKnown RBP9.1□□□□□ -0.95
CHPT1-208ENST00000552215 TMEM143Q96AN5 459 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 CCDC127Q96BQ5 260 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 EIF2AK1Q9BQI3 630 aaKnown RBP9.1□□□□□ -0.95
CHPT1-208ENST00000552215 AP5M1Q9H0R1 490 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 GPRC5CQ9NQ84 441 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 GOLGA8IPA6NC78 632 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 GOLGA8JA6NMD2 632 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 CTSHP09668 335 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 CA8P35219 290 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 GOLGA8FQ08AF8 430 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 GOLGA8DPQ0D2H9 430 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 NFX1Q12986 1120 aaKnown RBP9.1□□□□□ -0.95
CHPT1-208ENST00000552215 CRHR2Q13324 411 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 TMC6Q7Z403 805 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 WDR18Q9BV38 432 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 ARHGAP39Q9C0H5 1083 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 CBX8Q9HC52 389 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 PANK4Q9NVE7 773 aa9.1□□□□□ -0.95
CHPT1-208ENST00000552215 IFNKQ9P0W0 207 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms