RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 CLP1Q92989 425 aaKnown RBP12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 MTMR4Q9NYA4 1195 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 PLAGL2Q9UPG8 496 aa12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 NOP58Q9Y2X3 529 aaKnown RBP12.2□□□□□ -0.46
SLC48A1-209ENST00000552003 HAS3O00219 553 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 GOLIM4O00461 696 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 PI15O43692 258 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 ARHGAP1Q07960 439 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 ST3GAL2Q16842 350 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 RBM23Q86U06 439 aaKnown RBP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 FIBCD1Q8N539 461 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 KREMEN2Q8NCW0 462 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 STAG1Q8WVM7 1258 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 C11orf84Q9BUA3 381 aaPredicted RBP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 IFIH1Q9BYX4 1025 aaKnown RBP12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 CDH22Q9UJ99 828 aa12.19□□□□□ -0.46
SLC48A1-209ENST00000552003 FDX1P10109 184 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 ADD2P35612 726 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 NRIP1P48552 1158 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 PSEN2P49810 448 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 STAT2P52630 851 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 CWF19L1Q69YN2 538 aaKnown RBP12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 ASTLQ6HA08 431 aaPredicted RBP12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 DCLK2Q8N568 766 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 SCFD2Q8WU76 684 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 IL17RAQ96F46 866 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 PRR12Q9ULL5 1215 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 PLXNA4Q9HCM2 1894 aa12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
SLC48A1-209ENST00000552003 RAD50Q92878 1312 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 PRDM1O75626 825 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 ITGB1P05556 798 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 ATF7P17544 494 aaPredicted RBP12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 THPOP40225 353 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 PDE4BQ07343 736 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 LY6KQ17RY6 165 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 C7orf31Q8N865 590 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 SPPL3Q8TCT6 385 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 CLEC4DQ8WXI8 215 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 S1PR5Q9H228 398 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 C1orf115Q9H7X2 142 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 CCPG1Q9ULG6 757 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
SLC48A1-209ENST00000552003 TTC3P53804 2025 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 EMSYQ7Z589 1322 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 ZNF286BP0CG31 522 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 NPR3P17342 541 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 MCCP23508 829 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 KIAA0753Q2KHM9 967 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 CHST3Q7LGC8 479 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 AACSQ86V21 672 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 SERINC5Q86VE9 423 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 TRMT2AQ8IZ69 625 aaKnown RBP12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 ATP8B4Q8TF62 1192 aa12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 ZNF689Q96CS4 500 aaPredicted RBP12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 DNAJC2Q99543 621 aaKnown RBP12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 ADD3Q9UEY8 706 aaKnown RBP12.16□□□□□ -0.46
SLC48A1-209ENST00000552003 KIAA1217Q5T5P2 1943 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 ADGRA3Q8IWK6 1321 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 FANCMQ8IYD8 2048 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 PER2O15055 1255 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 CALML3P27482 149 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 MFSD10Q14728 455 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 ANGPT1Q15389 498 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 RSPO4Q2I0M5 234 aaPredicted RBP12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 FAM160B2Q86V87 743 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 CHURC1Q8WUH1 139 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 SEPT8Q92599 483 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 GMCL1Q96IK5 515 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 MKNK2Q9HBH9 465 aa12.15□□□□□ -0.46
SLC48A1-209ENST00000552003 MYH7P12883 1935 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 PTPDC1A2A3K4 754 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 PLA2G6O60733 806 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 TTLL1O95922 423 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 F2P00734 622 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 LMNAP02545 664 aaKnown RBP12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 ICAM1P05362 532 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 CLCN5P51795 746 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 PDE4DQ08499 809 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 SBK1Q52WX2 424 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 ZBTB33Q86T24 672 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
SLC48A1-209ENST00000552003 COL26A1Q96A83 441 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms