RNA–Protein interactions for RNA: ENST00000551297.6

TMEM116-214, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-214ENST00000551297 PLA2G4BP0C869 781 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 IDEP14735 1019 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 VCAM1P19320 739 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 COPB2P35606 906 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 PRELPP51888 382 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 COPB1P53618 953 aaKnown RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 BACE1P56817 501 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 STX17P56962 302 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 JAG1P78504 1218 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 CCZ1BP86790 482 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 CCZ1P86791 482 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 PPP2R3AQ06190 1150 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 COASYQ13057 564 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 TBX2Q13207 712 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 MCM6Q14566 821 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 NR1I3Q14994 352 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 KRT31Q15323 416 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 ZYXQ15942 572 aaKnown RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 ANGEL2Q5VTE6 544 aaKnown RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 LRCH2Q5VUJ6 765 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 ARHGAP27Q6ZUM4 889 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 GPBP1Q86WP2 473 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 MYOCDQ8IZQ8 938 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 RDM1Q8NG50 284 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 DDX12PQ92771 950 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 STAMQ92783 540 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 SLC5A5Q92911 643 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 LENG9Q96B70 501 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 CDHR1Q96JP9 859 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 CEP63Q96MT8 703 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 ZNF830Q96NB3 372 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 BAG1Q99933 345 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 TIPINQ9BVW5 301 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 SAMSN1Q9NSI8 373 aaKnown RBP8.7□□□□□ -1.02
TMEM116-214ENST00000551297 GGA3Q9NZ52 723 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 SEL1LQ9UBV2 794 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 NRBP1Q9UHY1 535 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 GDAQ9Y2T3 454 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 RPTORQ8N122 1335 aa8.7□□□□□ -1.02
TMEM116-214ENST00000551297 FRMD3A2A2Y4 597 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 MYMKA6NI61 221 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 OPLAHO14841 1288 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 ATP2A1O14983 1001 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 MSH4O15457 936 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 PPP1R12BO60237 982 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 EYA4O95677 639 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SSBP05455 408 aaKnown RBP eCLIP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SLURP2P0DP57 97 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 CASP1P29466 404 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 HOXA13P31271 388 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 MTIF2P46199 727 aaKnown RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 IREB2P48200 963 aaKnown RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SPIRE1Q08AE8 756 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 LRMPQ12912 555 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 MTMR2Q13614 643 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 ALCAMQ13740 583 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 PTPN14Q15678 1187 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 PCNX4Q63HM2 1172 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 CENPPQ6IPU0 288 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 TTI2Q6NXR4 508 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 ARMCX5Q6P1M9 558 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SAMD7Q7Z3H4 446 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 CCDC84Q86UT8 332 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SULF1Q8IWU6 871 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SMYD4Q8IYR2 804 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 CCAR2Q8N163 923 aaKnown RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 TXLNBQ8N3L3 684 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 MB21D1Q8N884 522 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 SLC17A8Q8NDX2 589 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 ZNF397Q8NF99 534 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 DCPSQ96C86 337 aaKnown RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 PLIN2Q99541 437 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 ZNF577Q9BSK1 485 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 TBC1D22BQ9NU19 505 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 PANK4Q9NVE7 773 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 ZNHIT6Q9NWK9 470 aaKnown RBP8.69□□□□□ -1.02
TMEM116-214ENST00000551297 VAV3Q9UKW4 847 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 KIAA1024Q9UPX6 916 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 COL4A3BPQ9Y5P4 624 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 CSADQ9Y600 493 aa8.69□□□□□ -1.02
TMEM116-214ENST00000551297 PARP14Q460N5 1801 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 IGLV3-22A0A075B6J6 115 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 POTEB3A0JP26 581 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 POTECB2RU33 542 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 B4DLN1 442 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 FAM86B1E9PN63 330 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 MEIS1O00470 390 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 EIF3DO15371 548 aaKnown RBP eCLIP8.68□□□□□ -1.02
TMEM116-214ENST00000551297 MAFGO15525 162 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 EDIL3O43854 480 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 MFAP3LO75121 409 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 FAM86B2P0C5J1 330 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 PTPRAP18433 802 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 SFNP31947 248 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 ABCD1P33897 745 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 PBX1P40424 430 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 JAK3P52333 1124 aa8.68□□□□□ -1.02
TMEM116-214ENST00000551297 FKBP3Q00688 224 aaKnown RBP8.68□□□□□ -1.02
TMEM116-214ENST00000551297 EHHADHQ08426 723 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms