RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 AK8Q96MA6 479 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 BAG1Q99933 345 aaPredicted RBP13.38□□□□□ -0.27
NR4A1-215ENST00000550557 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 INPP5FQ9Y2H2 1132 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 ABCC12Q96J65 1359 aa13.38□□□□□ -0.27
NR4A1-215ENST00000550557 NMT2O60551 498 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 LDHDQ86WU2 507 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 ERO1BQ86YB8 467 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 WDR64B1ANS9 1081 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 PLEKHA8P1O95397 391 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 TXNP10599 105 aaKnown RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 KCNJ6P48051 423 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 LACTBP83111 547 aaPredicted RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 NRBP1Q9UHY1 535 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 GSG1L2A8MUP6 293 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 GAP43P17677 238 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 KARSQ15046 597 aaKnown RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 DYNC1LI2O43237 492 aaPredicted RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 ALDH1A1P00352 501 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 RFX5P48382 616 aaPredicted RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 KRT76Q01546 638 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 MAP2K1Q02750 393 aaPredicted RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 CKAP4Q07065 602 aaKnown RBP13.37□□□□□ -0.27
NR4A1-215ENST00000550557 TMTC3Q6ZXV5 915 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 SLITRK6Q9H5Y7 841 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 TXNDC16Q9P2K2 825 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
NR4A1-215ENST00000550557 K7ERI5 159 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 NDUFA8P51970 172 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 EVCP57679 992 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 OSTNP61366 133 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 GIMAP7Q8NHV1 300 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SNX25Q9H3E2 840 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SLC25A27O95847 323 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 TFAMQ00059 246 aaKnown RBP13.36□□□□□ -0.27
NR4A1-215ENST00000550557 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 TBC1D10CQ8IV04 446 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SLC39A2Q9NP94 309 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 TAB2Q9NYJ8 693 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 NFE2L3Q9Y4A8 694 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 KDM6AO15550 1401 aaPredicted RBP13.36□□□□□ -0.27
NR4A1-215ENST00000550557 PXDNQ92626 1479 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SLC39A14Q15043 492 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SLC9C1Q4G0N8 1177 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 KCNV1Q6PIU1 500 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SCYL3Q8IZE3 742 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 GCNAQ96QF7 691 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 METTL14Q9HCE5 456 aaKnown RBP13.36□□□□□ -0.27
NR4A1-215ENST00000550557 USTQ9Y2C2 406 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 TUBBP07437 444 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 RARBP10826 455 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 PTPREP23469 700 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 ALX1Q15699 326 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SND1Q7KZF4 910 aaKnown RBP eCLIP13.36□□□□□ -0.27
NR4A1-215ENST00000550557 GPC2Q8N158 579 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 IGSF22Q8N9C0 903 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 SYMPKQ92797 1274 aaKnown RBP13.36□□□□□ -0.27
NR4A1-215ENST00000550557 PPP2R3CQ969Q6 453 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 KAZALD1Q96I82 304 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 MIS12Q9H081 205 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 FAM204AQ9H8W3 233 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 CTTNBP2NLQ9P2B4 639 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
NR4A1-215ENST00000550557 STK10O94804 968 aaKnown RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 ADAM9Q13443 819 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 MKRN1Q9UHC7 482 aaKnown RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 GUCA1BQ9UMX6 200 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 DMTNQ08495 405 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 NR5A1Q13285 461 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 SEL1L2Q5TEA6 688 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 ENAHQ8N8S7 591 aaPredicted RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 PLCD4Q9BRC7 762 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 VCPKMTQ9H867 229 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 TYW5A2RUC4 315 aaKnown RBP13.35□□□□□ -0.27
NR4A1-215ENST00000550557 E7EVH7 732 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 MCM6Q14566 821 aa13.35□□□□□ -0.27
NR4A1-215ENST00000550557 PPM1KQ8N3J5 372 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms