RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 GGPS1O95749 300 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 CXCL10P02778 98 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 ZNF286BP0CG31 522 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 HOXA13P31271 388 aaPredicted RBP26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 WTAPQ15007 396 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 GNPTABQ3T906 1256 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 CYB5R4Q7L1T6 521 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 FCHSD1Q86WN1 690 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 NCOA7Q8NI08 942 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 CTAGE1Q96RT6 745 aa26.73■■□□□ 1.87
SMARCD1-209ENST00000550477 EMSYQ7Z589 1322 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 PNMA6FA0A0J9YX94 578 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 OPLAHO14841 1288 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 GRM4Q14833 912 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 TTC22Q5TAA0 569 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 CATIPQ7Z7H3 387 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 DHX38Q92620 1227 aaKnown RBP26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 RAD9AQ99638 391 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 RIOX1Q9H6W3 641 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 LMCD1Q9NZU5 365 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 NCOR1O75376 2440 aa26.72■■□□□ 1.87
SMARCD1-209ENST00000550477 STAM2O75886 525 aa26.71■■□□□ 1.87
SMARCD1-209ENST00000550477 HOXD8P13378 290 aaPredicted RBP26.71■■□□□ 1.87
SMARCD1-209ENST00000550477 PIGSQ96S52 555 aa26.71■■□□□ 1.87
SMARCD1-209ENST00000550477 NOP56O00567 594 aaKnown RBP26.7■■□□□ 1.86
SMARCD1-209ENST00000550477 PPP1R11O60927 126 aaPredicted RBP26.7■■□□□ 1.86
SMARCD1-209ENST00000550477 NBNO60934 754 aa26.7■■□□□ 1.86
SMARCD1-209ENST00000550477 HSDL1Q3SXM5 330 aa26.7■■□□□ 1.86
SMARCD1-209ENST00000550477 RGS20O76081 388 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 GJB5O95377 273 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 CYP21A2P08686 494 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 BMP1P13497 986 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 GRB10Q13322 594 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 GPNMBQ14956 572 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 ZNF618Q5T7W0 954 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 HLA-CQ95604 372 aa26.69■■□□□ 1.86
SMARCD1-209ENST00000550477 C17orf102A2RUQ5 167 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 H3BRB1 525 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 LGR5O75473 907 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 GNAT1P11488 350 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 UBA1P22314 1058 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 TFF2Q03403 129 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 NEDD9Q14511 834 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 CUL5Q93034 780 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 USP26Q9BXU7 913 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 TUT1Q9H6E5 874 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 BAZ2BQ9UIF8 2168 aaKnown RBP26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 CHD9Q3L8U1 2897 aa26.68■■□□□ 1.86
SMARCD1-209ENST00000550477 EPOPA6NHQ4 379 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 RSPH10B2B2RC85 870 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 SORBS3O60504 671 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 RSPH10BP0C881 870 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 THPOP40225 353 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 DEFB103AP81534 67 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 ATP6V0A1Q93050 837 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 TGS1Q96RS0 853 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 IL25Q9H293 177 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 INSL6Q9Y581 213 aa26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 TCF20Q9UGU0 1960 aaKnown RBP26.67■■□□□ 1.86
SMARCD1-209ENST00000550477 AMHP03971 560 aa26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 COL9A1P20849 921 aa26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 CHMLP26374 656 aa26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 ZNF200P98182 395 aaPredicted RBP26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 SERINC5Q86VE9 423 aa26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 CTCFLQ8NI51 663 aaPredicted RBP26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 C16orf70Q9BSU1 422 aa26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 SPTBN5Q9NRC6 3674 aaKnown RBP26.66■■□□□ 1.86
SMARCD1-209ENST00000550477 E7EWF7 191 aa26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 GSPT1P15170 499 aaKnown RBP26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 KIF5BP33176 963 aa26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 SP2Q02086 613 aa26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 TROAPQ12815 778 aa26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 TRIM71Q2Q1W2 868 aaKnown RBP26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 SMARCC2Q8TAQ2 1214 aa26.65■■□□□ 1.86
SMARCD1-209ENST00000550477 CAND2O75155 1236 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 ARHGEF15O94989 841 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 KCNQ1P51787 676 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 PTH1RQ03431 593 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 IL31RAQ8NI17 732 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 RRP36Q96EU6 259 aaKnown RBP26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 MAP3K14Q99558 947 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 C1QTNF1Q9BXJ1 281 aa26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 SEC63Q9UGP8 760 aaKnown RBP26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 ZNF215Q9UL58 517 aaPredicted RBP26.64■■□□□ 1.86
SMARCD1-209ENST00000550477 LCHNA4D1U4 455 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 FIBPO43427 364 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 CYTH3O43739 400 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 LGALS2P05162 132 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 ICAM3P32942 547 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 ERVK-21P61565 698 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 KRT40Q6A162 431 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 FAM117BQ6P1L5 589 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 XRRA1Q6P2D8 792 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 CASC1Q6TDU7 716 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 METTL7BQ6UX53 244 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 TMCO2Q7Z6W1 182 aaPredicted RBP26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 NLRX1Q86UT6 975 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 TMTC2Q8N394 836 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 LZTS2Q9BRK4 669 aa26.63■■□□□ 1.85
SMARCD1-209ENST00000550477 SMIM10L2AP0DMW4 78 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms