RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, human

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-206	ENST00000549842	OR14I1	A6ND48	311 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	ABLIM1	O14639	778 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	CRTAM	O95727	393 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	ARL4A	P40617	200 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	SEPHS1	P49903	392 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	NEK2	P51955	445 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	ITK	Q08881	620 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	USP53	Q70EK8	1073 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	DDX53	Q86TM3	631 aa	Known RBP	5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	TSR2	Q969E8	191 aa	Known RBP	5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	C1orf159	Q96HA4	380 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	PPP1R16B	Q96T49	567 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	SLC38A3	Q99624	504 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	ZFYVE21	Q9BQ24	234 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	ORAI3	Q9BRQ5	295 aa		5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	NSUN3	Q9H649	340 aa	Known RBP	5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.7	□□□□□ -1.5
CPNE8-206	ENST00000549842	E2F8	A0AVK6	867 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	TPD52L2	O43399	206 aa	Known RBP	5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	C8A	P07357	584 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	BPI	P17213	487 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	GUCY1A3	Q02108	690 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	MVK	Q03426	396 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	MTMR1	Q13613	665 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	SART3	Q15020	963 aa	Known RBP	5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	TESK1	Q15569	626 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	SEPT7	Q16181	437 aa	Known RBP	5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	PRSS53	Q2L4Q9	553 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	LHFPL2	Q6ZUX7	228 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	PASD1	Q8IV76	773 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	KSR1	Q8IVT5	923 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	WDR75	Q8IWA0	830 aa	Known RBP	5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	MTMR8	Q96EF0	704 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	MMP19	Q99542	508 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	PDLIM7	Q9NR12	457 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	RIPOR2	Q9Y4F9	1068 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	TRAF6	Q9Y4K3	522 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	PCDHA9	Q9Y5H5	950 aa		5.69	□□□□□ -1.5
CPNE8-206	ENST00000549842	ASXL2	Q76L83	1435 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	KRTAP9-6	A0A140TA67	174 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	TEX51	A0A1B0GUA7	166 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	NEMP1	O14524	444 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	SEMA7A	O75326	666 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	TSPAN15	O95858	294 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	MPO	P05164	745 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	MED14OS	P0DP75	135 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	PYGM	P11217	842 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	YBX3	P16989	372 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	PRKCA	P17252	672 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	PAM	P19021	973 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	GLDC	P23378	1020 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	RAB27A	P51159	221 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	CYP4F8	P98187	520 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	TMEM62	Q0P6H9	643 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	DPY19L1	Q2PZI1	675 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	ZNF648	Q5T619	568 aa	Predicted RBP	5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	PIK3R6	Q5UE93	754 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	IQCE	Q6IPM2	695 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	CCSAP	Q6IQ19	270 aa	Predicted RBP	5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	DENND5A	Q6IQ26	1287 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	CHPF	Q8IZ52	775 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	IFNL3	Q8IZI9	196 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	KREMEN2	Q8NCW0	462 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	NUP43	Q8NFH3	380 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	DIRC2	Q96SL1	478 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	MYH16	Q9H6N6	1097 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	TNFRSF12A	Q9NP84	129 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	SAMD15	Q9P1V8	674 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	IMPACT	Q9P2X3	320 aa		5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	APOBEC2	Q9Y235	224 aa	Known RBP	5.68	□□□□□ -1.5
CPNE8-206	ENST00000549842	SHTN1	A0MZ66	631 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	STXBP3	O00186	592 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	SRGAP3	O43295	1099 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	AKAP10	O43572	662 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	PEX14	O75381	377 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	KCNA6	P17658	529 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	PDE6B	P35913	854 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	GPR85	P60893	370 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	CYP4F3	Q08477	520 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	SCRN1	Q12765	414 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	HLTF	Q14527	1009 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	NR1I3	Q14994	352 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	E4F1	Q66K89	784 aa	Predicted RBP	5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	OLFML2B	Q68BL8	750 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	KCNT2	Q6UVM3	1135 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	KRTAP19-1	Q8IUB9	90 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	CHMP4C	Q96CF2	233 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	CAMKK2	Q96RR4	588 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	GPR27	Q9NS67	375 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	NPFFR2	Q9Y5X5	522 aa		5.67	□□□□□ -1.5
CPNE8-206	ENST00000549842	LOC102724159	A0A0B4J2E5	919 aa		5.66	□□□□□ -1.5
CPNE8-206	ENST00000549842	NPHP3-ACAD11	A0A0J9YXS1	232 aa		5.66	□□□□□ -1.5
CPNE8-206	ENST00000549842	MYOCOS	A0A1B0GUC4	107 aa		5.66	□□□□□ -1.5
CPNE8-206	ENST00000549842		A0A1W2PQ27	194 aa		5.66	□□□□□ -1.5
CPNE8-206	ENST00000549842		A0A1W2PQ64	194 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms