RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 MORC4Q8TE76 937 aa9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 CLP1Q92989 425 aaKnown RBP9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 MEIS3Q99687 375 aa9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 DBNDD2Q9BQY9 259 aa9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 PLVAPQ9BX97 442 aa9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 DCP1AQ9NPI6 582 aaPredicted RBP9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 CYP39A1Q9NYL5 469 aa9.9□□□□□ -0.82
SMARCD1-207ENST00000549526 TXNP10599 105 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 NPR3P17342 541 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 TRIM71Q2Q1W2 868 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 TKFCQ3LXA3 575 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 PPM1JQ5JR12 505 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 ZKSCAN2Q63HK3 967 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 POF1BQ8WVV4 589 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 WNT8BQ93098 351 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 ALG1Q9BT22 464 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 ADD3Q9UEY8 706 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 FLNBO75369 2602 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 MYH7BA7E2Y1 1941 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 BAZ2AQ9UIF9 1905 aaKnown RBP9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 SPEGQ15772 3267 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
SMARCD1-207ENST00000549526 ADGRA3Q8IWK6 1321 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 LCTP09848 1927 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 MYH4Q9Y623 1939 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ZFYVE26Q68DK2 2539 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 C2CD4DB7Z1M9 353 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ITGB1P05556 798 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 GNAI3P08754 354 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 FDX1P10109 184 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 CASTP20810 708 aaKnown RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 TECP42680 631 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ALDH5A1P51649 535 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ZNF200P98182 395 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 LMNB2Q03252 620 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 MUM1L1Q5H9M0 696 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 VARS2Q5ST30 1063 aaKnown RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 DHX37Q8IY37 1157 aaKnown RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 FTSJ3Q8IY81 847 aaKnown RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 SUMF1Q8NBK3 374 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ATP8B4Q8TF62 1192 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 SCFD2Q8WU76 684 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 P2RX5Q93086 422 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ZNF512BQ96KM6 892 aaPredicted RBP9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 S1PR5Q9H228 398 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 GPR108Q9NPR9 543 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 CLIP2Q9UDT6 1046 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 LIMD1Q9UGP4 676 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 ANGPTL2Q9UKU9 493 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 NBEAQ8NFP9 2946 aa9.88□□□□□ -0.83
SMARCD1-207ENST00000549526 CYP2D7A0A087X1C5 515 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 PPFIA3O75145 1194 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 ZIC2O95409 532 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 SP9P0CG40 484 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 SRGAP2BP0DMP2 458 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 PDE4DQ08499 809 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 IKQ13123 557 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 NAALADL2Q58DX5 795 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 TMED8Q6PL24 325 aaPredicted RBP9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 AMOTL1Q8IY63 956 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 CRIPAKQ8N1N5 446 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 TMEM57Q8N5G2 664 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 KLHL23Q8NBE8 558 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 KAT2BQ92831 832 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 SECISBP2LQ93073 1101 aaKnown RBP9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 FBXL21Q9UKT6 434 aa9.87□□□□□ -0.83
SMARCD1-207ENST00000549526 FSD2A1L4K1 749 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 TMEM232C9JQI7 657 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 KINO60870 393 aaKnown RBP9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 MMP3P08254 477 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 KCNA4P22459 653 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 RFX1P22670 979 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 PSEN2P49810 448 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 BAATQ14032 418 aaPredicted RBP9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 TNNI3KQ59H18 835 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 C12orf60Q5U649 245 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 ANKRD54Q6NXT1 300 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 C16orf86Q6ZW13 317 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 CHST3Q7LGC8 479 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 SIX5Q8N196 739 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 VN1R2Q8NFZ6 395 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 ANTXR1Q9H6X2 564 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 PLXNA4Q9HCM2 1894 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 ERVK-5Q9HDB9 667 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 NYAP2Q9P242 653 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 FPGT-TNNI3KV9GXZ4 949 aa9.86□□□□□ -0.83
SMARCD1-207ENST00000549526 ASH1LQ9NR48 2969 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 KIAA1671Q9BY89 1806 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 GNAI2P04899 355 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 STAT2P52630 851 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 SNAP25P60880 206 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 DGKDQ16760 1214 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 KIAA0753Q2KHM9 967 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 SLC9C2Q5TAH2 1124 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 SYCE2Q6PIF2 218 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 ITPRIPQ8IWB1 547 aa9.85□□□□□ -0.83
SMARCD1-207ENST00000549526 CHURC1Q8WUH1 139 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms