RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 LGR5O75473 907 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 ARIH2O95376 493 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 TXNP10599 105 aaKnown RBP14.31□□□□□ -0.12
DDX54-206ENST00000549271 PDE4DQ08499 809 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 VPS53Q5VIR6 699 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 SLC30A10Q6XR72 485 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 SUGP1Q8IWZ8 645 aaKnown RBP14.31□□□□□ -0.12
DDX54-206ENST00000549271 TMEM192Q8IY95 271 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 CHMP4CQ96CF2 233 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 RANBP17Q9H2T7 1088 aaKnown RBP14.31□□□□□ -0.12
DDX54-206ENST00000549271 INCENPQ9NQS7 918 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 TCP11L1Q9NUJ3 509 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 FAM86C1Q9NVL1 165 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 ZMYM6O95789 1325 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 DMDP11532 3685 aa14.31□□□□□ -0.12
DDX54-206ENST00000549271 RIF1Q5UIP0 2472 aaKnown RBP14.31□□□□□ -0.12
DDX54-206ENST00000549271 RANBP6O60518 1105 aaKnown RBP14.3□□□□□ -0.12
DDX54-206ENST00000549271 AMHP03971 560 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 MMP3P08254 477 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 PTK7Q13308 1070 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 SMAD4Q13485 552 aaKnown RBP14.3□□□□□ -0.12
DDX54-206ENST00000549271 ZNF618Q5T7W0 954 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 CCDC62Q6P9F0 684 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 RASGRP2Q7LDG7 609 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 FBXO11Q86XK2 927 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 MYOCDQ8IZQ8 938 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 FBXL6Q8N531 539 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 AFG1LQ8WV93 481 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 WNT8BQ93098 351 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 FAM227BQ96M60 508 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 PNMA2Q9UL42 364 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 FAM186AA6NE01 2351 aa14.3□□□□□ -0.12
DDX54-206ENST00000549271 A0A0D9SFI3 127 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 STXBP3O00186 592 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 FGAP02671 866 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
DDX54-206ENST00000549271 PCP11498 1178 aaKnown RBP14.29□□□□□ -0.12
DDX54-206ENST00000549271 CLUL1Q15846 466 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 MCMDC2Q4G0Z9 681 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 DBF4BQ8NFT6 615 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 HDAC6Q9UBN7 1215 aa14.29□□□□□ -0.12
DDX54-206ENST00000549271 MYH7BA7E2Y1 1941 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 TRIM6-TRIM34B2RNG4 842 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 TBX10O75333 385 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 PDE4AP27815 886 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 ZXDAP98168 799 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 ARHGAP1Q07960 439 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 HYAL1Q12794 435 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
DDX54-206ENST00000549271 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 TTC14Q96N46 770 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 MPHOSPH6Q99547 160 aaKnown RBP14.28□□□□□ -0.12
DDX54-206ENST00000549271 TMEM47Q9BQJ4 181 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 IRF2BPLQ9H1B7 796 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 WDR87Q6ZQQ6 2873 aa14.28□□□□□ -0.12
DDX54-206ENST00000549271 PROB1E7EW31 1015 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 HAS3O00219 553 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 HSPD1P10809 573 aaKnown RBP14.27□□□□□ -0.13
DDX54-206ENST00000549271 SDSP20132 328 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 CASTP20810 708 aaKnown RBP14.27□□□□□ -0.13
DDX54-206ENST00000549271 CALML3P27482 149 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 NT5C2P49902 561 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 RPS6P62753 249 aaKnown RBP14.27□□□□□ -0.13
DDX54-206ENST00000549271 CCDC96Q2M329 555 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 PLEKHG4Q58EX7 1191 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 RNF207Q6ZRF8 634 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 ERMP1Q7Z2K6 904 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 ZNF589Q86UQ0 364 aaPredicted RBP14.27□□□□□ -0.13
DDX54-206ENST00000549271 C7orf31Q8N865 590 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 YME1L1Q96TA2 773 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 CD207Q9UJ71 328 aa14.27□□□□□ -0.13
DDX54-206ENST00000549271 LOC730098B7Z3J9 87 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 C5orf67F2Z3F1 127 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 EYA4O95677 639 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 GH1P01241 217 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 SNHG28P0DPA3 235 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 PDHBP11177 359 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 SLC16A2P36021 539 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 PSEN2P49810 448 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 VCPP55072 806 aaKnown RBP14.26□□□□□ -0.13
DDX54-206ENST00000549271 CBX2Q14781 532 aaPredicted RBP14.26□□□□□ -0.13
DDX54-206ENST00000549271 ATOH1Q92858 354 aaPredicted RBP14.26□□□□□ -0.13
DDX54-206ENST00000549271 LMAN2LQ9H0V9 348 aa14.26□□□□□ -0.13
DDX54-206ENST00000549271 WDR19Q8NEZ3 1342 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 GRM6O15303 877 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 LINC01565O15544 149 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 F2P00734 622 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 RB1P06400 928 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 LINC00271P0C7V0 271 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDX54-206ENST00000549271 ZNF200P98182 395 aaPredicted RBP14.25□□□□□ -0.13
DDX54-206ENST00000549271 SIGLEC14Q08ET2 396 aa14.25□□□□□ -0.13
DDX54-206ENST00000549271 HIC1Q14526 733 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms