RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TBC1D9BQ66K14 1250 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SPATS2Q86XZ4 545 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SUGP1Q8IWZ8 645 aaKnown RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 CD302Q8IX05 232 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 TGFBRAP1Q8WUH2 860 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 EYA3Q99504 573 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 CPVLQ9H3G5 476 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SMARCAL1Q9NZC9 954 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 COL4A3BPQ9Y5P4 624 aa10.91□□□□□ -0.66
SMARCD1-205ENST00000548573 SPATA31A1Q5TZJ5 1347 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 MYH10P35580 1976 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 BUB1O43683 1085 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 ERLIN2O94905 339 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 GNA14O95837 355 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 GLI1P08151 1106 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 NOVP48745 357 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 MRPS25P82663 173 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 CFAP58Q5T655 872 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 KRT79Q5XKE5 535 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 USP17L2Q6R6M4 530 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 KDM7AQ6ZMT4 941 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 C16orf86Q6ZW13 317 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 B4GALNT4Q76KP1 1039 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 MYOCDQ8IZQ8 938 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 MICALL1Q8N3F8 863 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 ANKRD13CQ8N6S4 541 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 DDX12PQ92771 950 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 CEP63Q96MT8 703 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 PIGSQ96S52 555 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 TANGO6Q9C0B7 1094 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 RIOX1Q9H6W3 641 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 JAG2Q9Y219 1238 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
SMARCD1-205ENST00000548573 COL24A1Q17RW2 1714 aa10.9□□□□□ -0.67
SMARCD1-205ENST00000548573 CES2O00748 559 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 HEXIM1O94992 359 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 CDK8P49336 464 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 NAP1L1P55209 391 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 SKIDA1Q1XH10 827 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM83BQ5T0W9 1011 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 MMS22LQ6ZRQ5 1243 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 EIF1ADQ8N9N8 165 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 SNX29Q8TEQ0 813 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 WHAMMQ8TF30 809 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 MS4A14Q96JA4 679 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 EHD4Q9H223 541 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 ATP6V0A2Q9Y487 856 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 TLR2O60603 784 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 PALMO75781 387 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 NOL4O94818 638 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 CARSP49589 748 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 SLC18A3Q16572 532 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 LINC00116Q8NCU8 138 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 CCDC43Q96MW1 224 aaKnown RBP10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 PAGR1Q9BTK6 254 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 EPB41L5Q9HCM4 733 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 TMEM260Q9NX78 707 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 NFU1Q9UMS0 254 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 CNTNAP4Q9C0A0 1308 aa10.89□□□□□ -0.67
SMARCD1-205ENST00000548573 ZNF233A6NK53 670 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 SRRM3A6NNA2 597 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 BTNL10A8MVZ5 291 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 NDUFAB1O14561 156 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 SLC37A4O43826 429 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 EDIL3O43854 480 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 KRT14P02533 472 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 GTF2A1P52655 376 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 GUCY2DQ02846 1103 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 DIXDC1Q155Q3 683 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 CDC37Q16543 378 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 CCDC40Q4G0X9 1142 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 PPP4R3AQ6IN85 833 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 DNAJC19Q96DA6 116 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 INPP4AQ96PE3 977 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 SETDB2Q96T68 719 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 VAT1LQ9HCJ6 419 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 NLRC4Q9NPP4 1024 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 AIPL1Q9NZN9 384 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 LEMD3Q9Y2U8 911 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 DDX60LQ5H9U9 1706 aaKnown RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 SBF2Q86WG5 1849 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 ATAD5Q96QE3 1844 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 POTEMA6NI47 508 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 TRAF5O00463 557 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 TDP2O95551 362 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 MYBP10242 640 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 KLRC1P26715 233 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 TM4SF1P30408 202 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 INPP5BP32019 993 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 ADCY7P51828 1080 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms