RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 LRRC37A3O60309 1634 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 MEFVO15553 781 aaPredicted RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 CYTH3O43739 400 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 TAL1P17542 331 aaPredicted RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 HIBADHP31937 336 aaKnown RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 CRKLP46109 303 aaKnown RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 LRRC14Q15048 493 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 FAM83BQ5T0W9 1011 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 KCNK18Q7Z418 384 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 FAM84BQ96KN1 310 aaPredicted RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 RPGRIP1Q96KN7 1286 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 PAIP2Q9BPZ3 127 aaKnown RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 RIOK1Q9BRS2 568 aaKnown RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 FGFBP2Q9BYJ0 223 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 AARSP49588 968 aaKnown RBP eCLIP16.69■□□□□ 0.26
BRF1-211ENST00000547530 MIIPQ5JXC2 388 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 HIBCHQ6NVY1 386 aaPredicted RBP16.69■□□□□ 0.26
BRF1-211ENST00000547530 PHLDB2Q86SQ0 1253 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 CCDC170Q8IYT3 715 aa16.69■□□□□ 0.26
BRF1-211ENST00000547530 NFAT5O94916 1531 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 PPP1R37O75864 691 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 NEBLO76041 1014 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 STAT3P40763 770 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 VPS41P49754 854 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 ARHGAP44Q17R89 818 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 KLHDC7AQ5VTJ3 777 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 MICALCLQ6ZW33 695 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 TBC1D1Q86TI0 1168 aaPredicted RBP16.68■□□□□ 0.26
BRF1-211ENST00000547530 FBXO3Q9UK99 471 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 FBXL5Q9UKA1 691 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 KIAA1024Q9UPX6 916 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 PTPN22Q9Y2R2 807 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 TEX11Q8IYF3 940 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
BRF1-211ENST00000547530 CLNS1AP54105 237 aaKnown RBP16.68■□□□□ 0.26
BRF1-211ENST00000547530 BANK1Q8NDB2 785 aa16.68■□□□□ 0.26
BRF1-211ENST00000547530 SLC9A1P19634 815 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 PLTPP55058 493 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 ZKSCAN8Q15776 578 aaPredicted RBP16.67■□□□□ 0.26
BRF1-211ENST00000547530 QPCTQ16769 361 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 TMEM266Q2M3C6 531 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 PEX26Q7Z412 305 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 REXO1Q8N1G1 1221 aaKnown RBP16.67■□□□□ 0.26
BRF1-211ENST00000547530 ZNF384Q8TF68 577 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 LARP4BQ92615 738 aaKnown RBP16.67■□□□□ 0.26
BRF1-211ENST00000547530 TMEM47Q9BQJ4 181 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 BCAS3Q9H6U6 928 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 ODF2LQ9ULJ1 636 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 GRIN2DO15399 1336 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 TARSL2A2RTX5 802 aaKnown RBP16.67■□□□□ 0.26
BRF1-211ENST00000547530 FOXO6A8MYZ6 492 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 TTI1O43156 1089 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 MSL1Q68DK7 614 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 CCDC13Q8IYE1 715 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
BRF1-211ENST00000547530 ELMO3Q96BJ8 720 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 IL17RBQ9NRM6 502 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 NALCNQ8IZF0 1738 aa16.67■□□□□ 0.26
BRF1-211ENST00000547530 USP17L5A8MUK1 530 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 RHOBTB3O94955 611 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 MYCNP04198 464 aaPredicted RBP16.66■□□□□ 0.26
BRF1-211ENST00000547530 TRIM28Q13263 835 aaKnown RBP16.66■□□□□ 0.26
BRF1-211ENST00000547530 ADAM9Q13443 819 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 GRIK5Q16478 980 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 ASIC2Q16515 512 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 SPRED3Q2MJR0 410 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 ANKRD42Q8N9B4 389 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 MYCBPAPQ8TBZ2 947 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 KLC4Q9NSK0 619 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 ZC3H4Q9UPT8 1303 aaKnown RBP16.66■□□□□ 0.26
BRF1-211ENST00000547530 A0A1W2PQC6 194 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 CHMP2AO43633 222 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 SLC37A4O43826 429 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 CTNND1O60716 968 aaKnown RBP16.66■□□□□ 0.26
BRF1-211ENST00000547530 TNFRSF25Q93038 417 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 LRRC4CQ9HCJ2 640 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 SRP68Q9UHB9 627 aaKnown RBP16.66■□□□□ 0.26
BRF1-211ENST00000547530 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 DDAH1O94760 285 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 CCDC172P0C7W6 258 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 TNNC1P63316 161 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.26
BRF1-211ENST00000547530 MAN2A1Q16706 1144 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 PKD2L1Q9P0L9 805 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 MINPP1Q9UNW1 487 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 PLAGL2Q9UPG8 496 aa16.66■□□□□ 0.26
BRF1-211ENST00000547530 KCNQ2O43526 872 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 LRRN2O75325 713 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 PPP2R5AQ15172 486 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 EMBQ6PCB8 327 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 MYOCDQ8IZQ8 938 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 GLG1Q92896 1179 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 LUC7LQ9NQ29 371 aaKnown RBP16.65■□□□□ 0.26
BRF1-211ENST00000547530 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 CRYBG1Q9Y4K1 1723 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 GFPT2O94808 682 aa16.65■□□□□ 0.26
BRF1-211ENST00000547530 MDH1P40925 334 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms