RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ARPP21Q9UBL0 812 aaPredicted RBP13.89□□□□□ -0.19
PTCH1-212ENST00000546744 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 MDH1P40925 334 aaKnown RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 GYS2P54840 703 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 TMED1Q13445 227 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 ZC3H18Q86VM9 953 aaKnown RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 AGGF1Q8N302 714 aaeCLIP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 NYXQ9GZU5 481 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 SENP1Q9P0U3 644 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 TMEM232C9JQI7 657 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 H0YCG3 227 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 KRT3P12035 628 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 ARL1P40616 181 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 DR1Q01658 176 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 E4F1Q66K89 784 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 STAMQ92783 540 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 TRIM55Q9BYV6 548 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 PLEKHA4Q9H4M7 779 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 SAMSN1Q9NSI8 373 aaKnown RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 STK36Q9NRP7 1315 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 CRCPO75575 148 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 KRT31Q15323 416 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 DIXDC1Q155Q3 683 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 TEDDM1Q5T9Z0 273 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 DYMQ7RTS9 669 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 MCF2L2Q86YR7 1114 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 SLFN12Q8IYM2 578 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 ZNF713Q8N859 430 aaPredicted RBP13.88□□□□□ -0.19
PTCH1-212ENST00000546744 SLC17A8Q8NDX2 589 aa13.88□□□□□ -0.19
PTCH1-212ENST00000546744 TRIM66O15016 1216 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 MMP1P03956 469 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 PTPREP23469 700 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ANXA13P27216 316 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 IQCB1Q15051 598 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ZNF790Q6PG37 636 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 MIGA1Q8NAN2 632 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 TTC25Q96NG3 672 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ITIH6Q6UXX5 1313 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ZFXP17010 805 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 GEN1Q17RS7 908 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 JARID2Q92833 1246 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 LRRC37BQ96QE4 947 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 MXD3Q9BW11 206 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 LCMT1Q9UIC8 334 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 MAP2P11137 1827 aaKnown RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 GCNT3O95395 438 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 GNPTABQ3T906 1256 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 AGBL2Q5U5Z8 902 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ANO5Q75V66 913 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 SIRT2Q8IXJ6 389 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 LZICQ8WZA0 190 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 LRGUKQ96M69 825 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 GYG2O15488 501 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 FGAP02671 866 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 AP2B1P63010 937 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ACTN3Q08043 901 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ADAM9Q13443 819 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 NAA30Q147X3 362 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ARID5BQ14865 1188 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ZCRB1Q8TBF4 217 aaKnown RBP13.87□□□□□ -0.19
PTCH1-212ENST00000546744 PGBD1Q96JS3 809 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 IRAK4Q9NWZ3 460 aa13.87□□□□□ -0.19
PTCH1-212ENST00000546744 ZNF532Q9HCE3 1301 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 FAM107AO95990 144 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 HNRNPH1P31943 449 aaKnown RBP13.86□□□□□ -0.19
PTCH1-212ENST00000546744 SERPINB4P48594 390 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 GRAMD4Q6IC98 578 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 ZNF710Q8N1W2 664 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 PROM2Q8N271 834 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 TRIML2Q8N7C3 387 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 CIAO1O76071 339 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 ABCB4P21439 1286 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 VSNL1P62760 191 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 TSGA10IPQ3SY00 556 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 TOGARAM2Q6ZUX3 1019 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 KIFC3Q9BVG8 833 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 ANAPC5Q9UJX4 755 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 PDE8AO60658 829 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 TOM1O60784 492 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 GSTA2P09210 222 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 IRAK1P51617 712 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 ANKRD13CQ8N6S4 541 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 MRRFQ96E11 262 aaKnown RBP13.86□□□□□ -0.19
PTCH1-212ENST00000546744 MAML3Q96JK9 1138 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 CCT8L2Q96SF2 557 aa13.86□□□□□ -0.19
PTCH1-212ENST00000546744 ARMT1Q9H993 441 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms