RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 SMARCC2Q8TAQ2 1214 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 PIBF1Q8WXW3 757 aa17.62■□□□□ 0.41
SSH1-204ENST00000546697 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
SSH1-204ENST00000546697 V9GY48 417 aaPredicted RBP17.62■□□□□ 0.41
SSH1-204ENST00000546697 MAFGO15525 162 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 PRPF3O43395 683 aaKnown RBP17.61■□□□□ 0.41
SSH1-204ENST00000546697 FOSP01100 380 aaPredicted RBP17.61■□□□□ 0.41
SSH1-204ENST00000546697 SUPT20HL2P0C7V6 817 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 MYCLP12524 364 aaPredicted RBP17.61■□□□□ 0.41
SSH1-204ENST00000546697 PSMC6P62333 389 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 RBL2Q08999 1139 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 PKN1Q16512 942 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 NBPF20Q3BBV1 942 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 RASIP1Q5U651 963 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 FAM177A1Q8N128 213 aaPredicted RBP17.61■□□□□ 0.41
SSH1-204ENST00000546697 CRYGNQ8WXF5 182 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 VTI1AQ96AJ9 217 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 GPRASP2Q96D09 838 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
SSH1-204ENST00000546697 RNF26Q9BY78 433 aaPredicted RBP17.61■□□□□ 0.41
SSH1-204ENST00000546697 UBIAD1Q9Y5Z9 338 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
SSH1-204ENST00000546697 hCG_1642624A0A1W2PR95 340 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 MYL3P08590 195 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 HOXC8P31273 242 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 EPHB4P54760 987 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 FPGSQ05932 587 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 AP3B2Q13367 1082 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 NEDD9Q14511 834 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 HSDL1Q3SXM5 330 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 METTL7BQ6UX53 244 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 DHX37Q8IY37 1157 aaKnown RBP17.6■□□□□ 0.41
SSH1-204ENST00000546697 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
SSH1-204ENST00000546697 CDHR1Q96JP9 859 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 CTAGE1Q96RT6 745 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 ZMYND12Q9H0C1 365 aa17.6■□□□□ 0.41
SSH1-204ENST00000546697 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 GGPS1O95749 300 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 SCG2P13521 617 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 ITGB5P18084 799 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 FGD1P98174 961 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 SHHQ15465 462 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 MCTP2Q6DN12 878 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 FAM109BQ6ICB4 259 aaPredicted RBP17.59■□□□□ 0.41
SSH1-204ENST00000546697 VWCEQ96DN2 955 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 C16orf70Q9BSU1 422 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 KATNAL1Q9BW62 490 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 TRPV6Q9H1D0 765 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 PCDHA6Q9UN73 950 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 PCDHA8Q9Y5H6 950 aa17.59■□□□□ 0.41
SSH1-204ENST00000546697 NAPAP54920 295 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 PPIGQ13427 754 aaKnown RBP eCLIP17.58■□□□□ 0.41e-7■■■■■ 29.8
SSH1-204ENST00000546697 C9orf50Q5SZB4 431 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 C16orf59Q7L2K0 433 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 NLRX1Q86UT6 975 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 TMEM199Q8N511 208 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 GIMAP8Q8ND71 665 aaPredicted RBP17.58■□□□□ 0.4
SSH1-204ENST00000546697 HIPK3Q9H422 1215 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 MYH7BA7E2Y1 1941 aa17.58■□□□□ 0.4
SSH1-204ENST00000546697 SPDYE3A6NKU9 549 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 KCNA2P16389 499 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 SREBF1P36956 1147 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 UBE2SQ16763 222 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 SPATA33Q96N06 139 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 WNT8AQ9H1J5 351 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 EHMT1Q9H9B1 1298 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 JADE2Q9NQC1 790 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 TRMT13Q9NUP7 481 aaKnown RBP17.57■□□□□ 0.4
SSH1-204ENST00000546697 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
SSH1-204ENST00000546697 SMCO2A6NFE2 343 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 CYP3A4P08684 503 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 ADCY7P51828 1080 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
SSH1-204ENST00000546697 TMEM240Q5SV17 173 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 NIPA1Q7RTP0 329 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 CCDC12Q8WUD4 166 aaPredicted RBP17.56■□□□□ 0.4
SSH1-204ENST00000546697 LRCH3Q96II8 777 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 GPR20Q99678 358 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 BCAS3Q9H6U6 928 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 IL23AQ9NPF7 189 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 SH3GLB2Q9NR46 395 aa17.56■□□□□ 0.4
SSH1-204ENST00000546697 UMODL1Q5DID0 1318 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 TANC1Q9C0D5 1861 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 PFKMP08237 780 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 CSF2RAP15509 400 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 PSEN2P49810 448 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 PSRC1Q6PGN9 363 aaPredicted RBP17.55■□□□□ 0.4
SSH1-204ENST00000546697 UPF3BQ9BZI7 483 aaKnown RBP17.55■□□□□ 0.4
SSH1-204ENST00000546697 MLXIPQ9HAP2 919 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 RTEL1Q9NZ71 1219 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 CHD9Q3L8U1 2897 aa17.55■□□□□ 0.4
SSH1-204ENST00000546697 MEIS1O00470 390 aa17.54■□□□□ 0.4
SSH1-204ENST00000546697 ATP9AO75110 1047 aa17.54■□□□□ 0.4
SSH1-204ENST00000546697 CYP2C18P33260 490 aa17.54■□□□□ 0.4
SSH1-204ENST00000546697 RFC2P35250 354 aa17.54■□□□□ 0.4
SSH1-204ENST00000546697 MFSD10Q14728 455 aa17.54■□□□□ 0.4
SSH1-204ENST00000546697 CAGE1Q8TC20 777 aa17.54■□□□□ 0.4
SSH1-204ENST00000546697 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.54■□□□□ 0.4
SSH1-204ENST00000546697 MXRA8Q9BRK3 442 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms