RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
SCAF11-208ENST00000546534 ALG1Q9BT22 464 aa14.98□□□□□ -0.01
SCAF11-208ENST00000546534 MFRPQ9BY79 579 aa14.98□□□□□ -0.01
SCAF11-208ENST00000546534 TOMM22Q9NS69 142 aa14.98□□□□□ -0.01
SCAF11-208ENST00000546534 INSL6Q9Y581 213 aa14.98□□□□□ -0.01
SCAF11-208ENST00000546534 SIP14410 1827 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 PSEN2P49810 448 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 ZNF200P98182 395 aaPredicted RBP14.97□□□□□ -0.01
SCAF11-208ENST00000546534 ZNF543Q08ER8 600 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 DGKDQ16760 1214 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 USH1GQ495M9 461 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 RRP12Q5JTH9 1297 aaKnown RBP14.97□□□□□ -0.01
SCAF11-208ENST00000546534 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 RGS22Q8NE09 1264 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 TAAR1Q96RJ0 339 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 CTNNA3Q9UI47 895 aa14.97□□□□□ -0.01
SCAF11-208ENST00000546534 TTC41PQ6P2S7 1318 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 LGR5O75473 907 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 HTRA4P83105 476 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-208ENST00000546534 MFSD10Q14728 455 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 PTPROQ16827 1216 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 EPC2Q52LR7 807 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 MYOCDQ8IZQ8 938 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 DBF4BQ8NFT6 615 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 OTUD7AQ8TE49 926 aaPredicted RBP14.96□□□□□ -0.01
SCAF11-208ENST00000546534 TCP11L1Q9NUJ3 509 aa14.96□□□□□ -0.01
SCAF11-208ENST00000546534 HAS3O00219 553 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 AMHP03971 560 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 ZNF286BP0CG31 522 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 SNHG28P0DPA3 235 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 ZP2Q05996 745 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 HIC1Q14526 733 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 KIAA0753Q2KHM9 967 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 TIGD5Q53EQ6 642 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 TCEAL5Q5H9L2 206 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 BANK1Q8NDB2 785 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 SYTL5Q8TDW5 730 aaPredicted RBP14.95□□□□□ -0.02
SCAF11-208ENST00000546534 NSUN6Q8TEA1 469 aaKnown RBP14.95□□□□□ -0.02
SCAF11-208ENST00000546534 ANKS1AQ92625 1134 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 KCNH6Q9H252 994 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 COL20A1Q9P218 1284 aa14.95□□□□□ -0.02
SCAF11-208ENST00000546534 DDX41Q9UJV9 622 aaKnown RBP14.95□□□□□ -0.02
SCAF11-208ENST00000546534 H3BNC9 293 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 F2P00734 622 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 GPM6BQ13491 265 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 ALX1Q15699 326 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 STXBP2Q15833 593 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 HFE2Q6ZVN8 426 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 PABPC5Q96DU9 382 aaKnown RBP14.94□□□□□ -0.02
SCAF11-208ENST00000546534 SAMD11Q96NU1 681 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 KATNAL1Q9BW62 490 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 UBA5Q9GZZ9 404 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 CPVLQ9H3G5 476 aa14.94□□□□□ -0.02
SCAF11-208ENST00000546534 GOLGA8HP0CJ92 632 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 COL19A1Q14993 1142 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 ADHFE1Q8IWW8 467 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 PPTC7Q8NI37 304 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 EMID1Q96A84 441 aaPredicted RBP14.93□□□□□ -0.02
SCAF11-208ENST00000546534 IWS1Q96ST2 819 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 RMDN3Q96TC7 470 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 PRKAG3Q9UGI9 489 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 FAM50BQ9Y247 325 aa14.93□□□□□ -0.02
SCAF11-208ENST00000546534 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 RSPH10B2B2RC85 870 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 FGAP02671 866 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 RSPH10BP0C881 870 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 IRS1P35568 1242 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 LAMC2Q13753 1193 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 PLEKHG4Q58EX7 1191 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 GPATCH4Q5T3I0 446 aaKnown RBP14.92□□□□□ -0.02
SCAF11-208ENST00000546534 DHX37Q8IY37 1157 aaKnown RBP14.92□□□□□ -0.02
SCAF11-208ENST00000546534 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 TTC14Q96N46 770 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 YME1L1Q96TA2 773 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 MAF1Q9H063 256 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 NSUN3Q9H649 340 aaKnown RBP14.92□□□□□ -0.02
SCAF11-208ENST00000546534 MRVI1Q9Y6F6 885 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 ABCB11O95342 1321 aa14.92□□□□□ -0.02
SCAF11-208ENST00000546534 EIF3JO75822 258 aaKnown RBP14.91□□□□□ -0.02
SCAF11-208ENST00000546534 UPP2O95045 317 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 NR3C2P08235 984 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 HOXD8P13378 290 aaPredicted RBP14.91□□□□□ -0.02
SCAF11-208ENST00000546534 EIF2AK2P19525 551 aaKnown RBP14.91□□□□□ -0.02
SCAF11-208ENST00000546534 THPOP40225 353 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 CDC37Q16543 378 aaPredicted RBP14.91□□□□□ -0.02
SCAF11-208ENST00000546534 ARHGEF16Q5VV41 709 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 SERINC5Q86VE9 423 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 FBXO11Q86XK2 927 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 TOP1MTQ969P6 601 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 OSBPL7Q9BZF2 842 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 CLDND1Q9NY35 253 aa14.91□□□□□ -0.02
SCAF11-208ENST00000546534 SORBS3O60504 671 aa14.9□□□□□ -0.02
SCAF11-208ENST00000546534 PPFIA4O75335 1185 aa14.9□□□□□ -0.02
SCAF11-208ENST00000546534 MX1P20591 662 aa14.9□□□□□ -0.02
SCAF11-208ENST00000546534 LTBRP36941 435 aa14.9□□□□□ -0.02
SCAF11-208ENST00000546534 HAND2P61296 217 aa14.9□□□□□ -0.02
SCAF11-208ENST00000546534 MCF2L2Q86YR7 1114 aa14.9□□□□□ -0.02
SCAF11-208ENST00000546534 SNX27Q96L92 541 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms