RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 HHIPL2Q6UWX4 724 aa12.98□□□□□ -0.33
CHERP-203ENST00000546361 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
CHERP-203ENST00000546361 PIGOQ8TEQ8 1089 aa12.98□□□□□ -0.33
CHERP-203ENST00000546361 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
CHERP-203ENST00000546361 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 PSMC2P35998 433 aaKnown RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 MRPS9P82933 396 aaKnown RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 TFAMQ00059 246 aaKnown RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 GRM4Q14833 912 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 TDRD7Q8NHU6 1098 aaKnown RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 KIAA1524Q8TCG1 905 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 NLRP7Q8WX94 980 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 NT5C1BQ96P26 610 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 PPP1R16BQ96T49 567 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 PSMD14O00487 310 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 OPA1O60313 960 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 ZEB2O60315 1214 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 GAS8O95995 478 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 MYL1P05976 194 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 FDX1P10109 184 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 SYCE1Q8N0S2 351 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 ASIC3Q9UHC3 531 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 FLT1P17948 1338 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 TLR3O15455 904 aaKnown RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 ENTPD3O75355 529 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 GMPSP49915 693 aaPredicted RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 PTK2Q05397 1052 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 IFRD2Q12894 506 aaPredicted RBP12.97□□□□□ -0.33
CHERP-203ENST00000546361 CFAP58Q5T655 872 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 TMEM206Q9H813 350 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 MTMR4Q9NYA4 1195 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 TTLL3Q9Y4R7 772 aa12.97□□□□□ -0.33
CHERP-203ENST00000546361 PTPREP23469 700 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 OSTNP61366 133 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 DAAM2Q86T65 1068 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 STAG2Q8N3U4 1231 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 GPR161Q8N6U8 529 aaKnown RBP12.96□□□□□ -0.33
CHERP-203ENST00000546361 DESI2Q9BSY9 194 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 CARD6Q9BX69 1037 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 DISC1Q9NRI5 854 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 POTEMA6NI47 508 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
CHERP-203ENST00000546361 POLR2BP30876 1174 aaKnown RBP12.96□□□□□ -0.33
CHERP-203ENST00000546361 SCYL2Q6P3W7 929 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 ANKRD13CQ8N6S4 541 aa12.96□□□□□ -0.33
CHERP-203ENST00000546361 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
CHERP-203ENST00000546361 SFI1A8K8P3 1242 aa12.96□□□□□ -0.34
CHERP-203ENST00000546361 STAMBPO95630 424 aa12.96□□□□□ -0.34
CHERP-203ENST00000546361 STOX1Q6ZVD7 989 aa12.96□□□□□ -0.34
CHERP-203ENST00000546361 OXER1Q8TDS5 423 aa12.96□□□□□ -0.34
CHERP-203ENST00000546361 FAM151AQ8WW52 585 aa12.96□□□□□ -0.34
CHERP-203ENST00000546361 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 ATRIPQ8WXE1 791 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 ZNF512BQ96KM6 892 aaPredicted RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 ELP3Q9H9T3 547 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 TBC1D22BQ9NU19 505 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 WDR64B1ANS9 1081 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 FERP16591 822 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 CCNE1P24864 410 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 PIK3CAP42336 1068 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 PDE6CP51160 858 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 PEX3P56589 373 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 COG2Q14746 738 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 TTBK2Q6IQ55 1244 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 KLHL7Q8IXQ5 586 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 MRFAP1L1Q96HT8 127 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 STMN4Q9H169 189 aaPredicted RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 RPAP3Q9H6T3 665 aaPredicted RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 ACAD9Q9H845 621 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 BARHL2Q9NY43 387 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 AMFRQ9UKV5 643 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 STK36Q9NRP7 1315 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 STK10O94804 968 aaKnown RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 EEF1GP26641 437 aaKnown RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 BPIFB4P59827 614 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 IRX5P78411 483 aaPredicted RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 CCDC105Q8IYK2 499 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 DEFB129Q9H1M3 183 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 NDUFB10O96000 172 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 IFNB1P01574 187 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 SBK1Q52WX2 424 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
CHERP-203ENST00000546361 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
CHERP-203ENST00000546361 ABCB11O95342 1321 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms