RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 EPB41L1Q9H4G0 881 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
SNHG1-224ENST00000545688 PPARGC1AQ9UBK2 798 aaKnown RBP7.55□□□□□ -1.2
SNHG1-224ENST00000545688 IQCA1LA6NCM1 817 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 PRODHO43272 600 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 PRICKLE3O43900 615 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-224ENST00000545688 NOBOXO60393 691 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 TADA3O75528 432 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 STK10O94804 968 aaKnown RBP7.54□□□□□ -1.2
SNHG1-224ENST00000545688 RTP5Q14D33 572 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 SKOR2Q2VWA4 1001 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-224ENST00000545688 ZNF761Q86XN6 746 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-224ENST00000545688 KYQ8NBH2 561 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
SNHG1-224ENST00000545688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.54□□□□□ -1.2
SNHG1-224ENST00000545688 PHF20Q9BVI0 1012 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 TRIM55Q9BYV6 548 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 GPR27Q9NS67 375 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 PCDHB4Q9Y5E5 795 aa7.54□□□□□ -1.2
SNHG1-224ENST00000545688 TCRBV5S2A0A599 114 aa7.53□□□□□ -1.2
SNHG1-224ENST00000545688 DGKIO75912 1065 aa7.53□□□□□ -1.2
SNHG1-224ENST00000545688 FGFR1P11362 822 aa7.53□□□□□ -1.2
SNHG1-224ENST00000545688 OSBP2Q969R2 916 aa7.53□□□□□ -1.2
SNHG1-224ENST00000545688 CELA3BP08861 270 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 PABPC1P11940 636 aaKnown RBP7.52□□□□□ -1.21
SNHG1-224ENST00000545688 RPL13P26373 211 aaKnown RBP7.52□□□□□ -1.21
SNHG1-224ENST00000545688 GJA9P57773 515 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 NKX3-2P78367 333 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 NTRK3Q16288 839 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-224ENST00000545688 KCNT2Q6UVM3 1135 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 FERMT3Q86UX7 667 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 CKAP2LQ8IYA6 745 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 ADAMTS17Q8TE56 1095 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 DDX1Q92499 740 aaKnown RBP7.52□□□□□ -1.21
SNHG1-224ENST00000545688 BDH2Q9BUT1 245 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 JAM3Q9BX67 310 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 NGRNQ9NPE2 291 aaKnown RBP7.52□□□□□ -1.21
SNHG1-224ENST00000545688 DTLQ9NZJ0 730 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 DUSP10Q9Y6W6 482 aa7.52□□□□□ -1.21
SNHG1-224ENST00000545688 BLACEA4D250 179 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 ADAM9Q13443 819 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 UBXN11Q5T124 520 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 ZFYVE27Q5T4F4 411 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 RSPO2Q6UXX9 243 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-224ENST00000545688 LRRC47Q8N1G4 583 aaKnown RBP7.51□□□□□ -1.21
SNHG1-224ENST00000545688 TTLL6Q8N841 843 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 DCAF4Q8WV16 495 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 TOE1Q96GM8 510 aaKnown RBP7.51□□□□□ -1.21
SNHG1-224ENST00000545688 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 MYOTQ9UBF9 498 aa7.51□□□□□ -1.21
SNHG1-224ENST00000545688 TRAV20A0A0B4J274 112 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 CNR2P34972 360 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 PRR31Q5SQ13 230 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 NSMFQ6X4W1 530 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 PIP4K2CQ8TBX8 421 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 SMOC1Q9H4F8 434 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 MSRB2Q9Y3D2 182 aa7.5□□□□□ -1.21
SNHG1-224ENST00000545688 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-224ENST00000545688 TEPPQ6URK8 271 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 LBX2Q6XYB7 198 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 SPATC1Q76KD6 591 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 PHOSPHO1Q8TCT1 267 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 ZSWIM3Q96MP5 696 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 KRTAP9-3Q9BYQ3 159 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 TANGO6Q9C0B7 1094 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 ASH2LQ9UBL3 628 aa7.49□□□□□ -1.21
SNHG1-224ENST00000545688 KRIT1O00522 736 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 DDX3XO00571 662 aaKnown RBP eCLIP7.48□□□□□ -1.21
SNHG1-224ENST00000545688 U2SURPO15042 1029 aaKnown RBP7.48□□□□□ -1.21
SNHG1-224ENST00000545688 LRG1P02750 347 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 PLP2Q04941 152 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 RGL3Q3MIN7 710 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 MCTP2Q6DN12 878 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 ZNF669Q96BR6 464 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-224ENST00000545688 SPATA9Q9BWV2 254 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 SLC6A20Q9NP91 592 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 WASF3Q9UPY6 502 aa7.48□□□□□ -1.21
SNHG1-224ENST00000545688 SLC27A2O14975 620 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 PDPK1O15530 556 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 MAFKO60675 156 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 ATP2B1P20020 1258 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 GRK2P25098 689 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 GRK3P35626 688 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 KIZQ2M2Z5 673 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 CYP4F22Q6NT55 531 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 PRRT2Q7Z6L0 340 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-224ENST00000545688 ZFYVE21Q9BQ24 234 aa7.47□□□□□ -1.21
SNHG1-224ENST00000545688 PPP1R1BQ9UD71 204 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-224ENST00000545688 ASXL2Q76L83 1435 aa7.46□□□□□ -1.21
SNHG1-224ENST00000545688 CCDC85CA6NKD9 419 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 COL6A2P12110 1019 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 GPR85P60893 370 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 GRIN1Q05586 938 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 FAM26FQ5R3K3 315 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 STYK1Q6J9G0 422 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 OTOP3Q7RTS5 596 aa7.46□□□□□ -1.22
SNHG1-224ENST00000545688 RBM12BQ8IXT5 1001 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms