RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 COASYQ13057 564 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 PKN1Q16512 942 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 EXOC3L4Q17RC7 722 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 MPHOSPH6Q99547 160 aaKnown RBP6.35□□□□□ -1.39
VPS50-220ENST00000544910 SELENOSQ9BQE4 189 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 CEP72Q9P209 647 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 AMFRQ9UKV5 643 aa6.35□□□□□ -1.39
VPS50-220ENST00000544910 TCP10L2B9ZVM9 353 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 PPIP5K2O43314 1243 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 ZEB2O60315 1214 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 KRT5P13647 590 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 CLNS1AP54105 237 aaKnown RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 MAP3K9P80192 1104 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 C10orf76Q5T2E6 689 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 SPATS2Q86XZ4 545 aaKnown RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 ADGRF4Q8IZF3 695 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 SMCR8Q8TEV9 937 aaPredicted RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 SCLT1Q96NL6 688 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 EMILIN3Q9NT22 766 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 FAM217BQ9NTX9 383 aaPredicted RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 PKD1L3Q7Z443 1732 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 VGLL3A8MV65 326 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 N4BP1O75113 896 aaKnown RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 GDF11O95390 407 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 CD44P16070 742 aaKnown RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 CYP2J2P51589 502 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 LACTBP83111 547 aaPredicted RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 TROAPQ12815 778 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 PABPC4Q13310 644 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS50-220ENST00000544910 SEPT6Q14141 434 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 NFIXQ14938 502 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 PPP1R7Q15435 360 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 SMIM5Q71RC9 77 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 MAEAQ7L5Y9 396 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 LMNTD2Q8IXW0 634 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 FAM237AA0A1B0GTK4 181 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 TTC26A0AVF1 554 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 ANO9A1A5B4 782 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 CCDC169A6NNP5 214 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 K7ENM7 598 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 APBA3O96018 575 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 EPHB4P54760 987 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 MYL7Q01449 175 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 DLGAP5Q15398 846 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 SLC10A5Q5PT55 438 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 FAM133AQ8N9E0 248 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 FAM204AQ9H8W3 233 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 PI4KBQ9UBF8 816 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 EIF3CLB5ME19 914 aaKnown RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 KIF4AO95239 1232 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 FCER1AP12319 257 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 CRKP46108 304 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 MDM2Q00987 491 aaPredicted RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 CASP8Q14790 479 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 ANKRD40Q6AI12 368 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 PDXDC2PQ6P474 469 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 PAXIP1Q6ZW49 1069 aaPredicted RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 IFT74Q96LB3 600 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 EIF3CQ99613 913 aaKnown RBP6.34□□□□□ -1.39
VPS50-220ENST00000544910 L2HGDHQ9H9P8 463 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 STK32BQ9NY57 414 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 CTTNBP2NLQ9P2B4 639 aa6.34□□□□□ -1.39
VPS50-220ENST00000544910 LRRC53A6NM62 1247 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 RNF40O75150 1001 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 GYPCP04921 128 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 MYCLP12524 364 aaPredicted RBP6.34□□□□□ -1.4
VPS50-220ENST00000544910 FERP16591 822 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 RASA1P20936 1047 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 PSMC2P35998 433 aaKnown RBP6.34□□□□□ -1.4
VPS50-220ENST00000544910 SARSP49591 514 aaKnown RBP6.34□□□□□ -1.4
VPS50-220ENST00000544910 GUCY2FP51841 1108 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 LRCH2Q5VUJ6 765 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 KRT26Q7Z3Y9 468 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 FAN1Q9Y2M0 1017 aa6.34□□□□□ -1.4
VPS50-220ENST00000544910 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 MEIS1O00470 390 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 KIF3CO14782 793 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 ZBED4O75132 1171 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 TRIM37O94972 964 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SRGNP10124 158 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 BMP3P12645 472 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 APBA1Q02410 837 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 ARHGAP44Q17R89 818 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 WDR44Q5JSH3 913 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 RAD9BQ6WBX8 426 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 LARGE2Q8N3Y3 721 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 PLCB1Q9NQ66 1216 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 RNF14Q9UBS8 474 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SUGT1Q9Y2Z0 365 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 NUP188Q5SRE5 1749 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 KRIT1O00522 736 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SPOPO43791 374 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 DKC1O60832 514 aaKnown RBP eCLIP6.33□□□□□ -1.4
VPS50-220ENST00000544910 TDP2O95551 362 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 LMNB1P20700 586 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 CTNNA2P26232 953 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 SMARCA1P28370 1054 aa6.33□□□□□ -1.4
VPS50-220ENST00000544910 HPDP32754 393 aaPredicted RBP6.33□□□□□ -1.4
VPS50-220ENST00000544910 CYP4A11Q02928 519 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms